RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 RBM42Q9BTD8 480 aaKnown RBP20.99■□□□□ 0.95
CSGALNACT1-204ENST00000517494 ADCY9O60503 1353 aa20.98■□□□□ 0.95
CSGALNACT1-204ENST00000517494 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
CSGALNACT1-204ENST00000517494 RTCBQ9Y3I0 505 aaKnown RBP20.97■□□□□ 0.95
CSGALNACT1-204ENST00000517494 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
CSGALNACT1-204ENST00000517494 TRAPPC3LQ5T215 181 aa20.96■□□□□ 0.95
CSGALNACT1-204ENST00000517494 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
CSGALNACT1-204ENST00000517494 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
CSGALNACT1-204ENST00000517494 BCS1LQ9Y276 419 aa20.93■□□□□ 0.94
CSGALNACT1-204ENST00000517494 KDRP35968 1356 aa20.93■□□□□ 0.94
CSGALNACT1-204ENST00000517494 ERVV-2B6SEH9 535 aa20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 CABP4P57796 275 aa20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 PLEKHO1Q53GL0 409 aaPredicted RBP20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 DCAF5Q96JK2 942 aa20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 SLC4A9Q96Q91 983 aa20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
CSGALNACT1-204ENST00000517494 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
CSGALNACT1-204ENST00000517494 HSPA6P17066 643 aa20.91■□□□□ 0.94
CSGALNACT1-204ENST00000517494 A0A0G2JLW4 131 aa20.9■□□□□ 0.94
CSGALNACT1-204ENST00000517494 RFC4P35249 363 aa20.9■□□□□ 0.94
CSGALNACT1-204ENST00000517494 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
CSGALNACT1-204ENST00000517494 ARHGEF1Q92888 912 aaKnown RBP20.9■□□□□ 0.94
CSGALNACT1-204ENST00000517494 PANK3Q9H999 370 aa20.9■□□□□ 0.94
CSGALNACT1-204ENST00000517494 CCDC87Q9NVE4 849 aa20.89■□□□□ 0.93
CSGALNACT1-204ENST00000517494 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
CSGALNACT1-204ENST00000517494 C1orf141Q5JVX7 400 aa20.88■□□□□ 0.93
CSGALNACT1-204ENST00000517494 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
CSGALNACT1-204ENST00000517494 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
CSGALNACT1-204ENST00000517494 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 PLEKHG2Q9H7P9 1386 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 ADRA2BP18089 450 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 MTHFSP49914 203 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 TGFB2P61812 414 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 AMOTQ4VCS5 1084 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 ARHGAP27Q6ZUM4 889 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 MORC1Q86VD1 984 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
CSGALNACT1-204ENST00000517494 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 HSPA5P11021 654 aaKnown RBP20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 GYS1P13807 737 aa20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 DPEP1P16444 411 aa20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 EIF4G2P78344 907 aaKnown RBP eCLIP20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 RC3H1Q5TC82 1133 aaKnown RBP20.86■□□□□ 0.93
CSGALNACT1-204ENST00000517494 KIF3CO14782 793 aa20.85■□□□□ 0.93
CSGALNACT1-204ENST00000517494 FCHSD2O94868 740 aa20.85■□□□□ 0.93
CSGALNACT1-204ENST00000517494 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
CSGALNACT1-204ENST00000517494 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
CSGALNACT1-204ENST00000517494 SRP68Q9UHB9 627 aaKnown RBP20.83■□□□□ 0.93
CSGALNACT1-204ENST00000517494 N4BP2Q86UW6 1770 aaPredicted RBP20.82■□□□□ 0.92
CSGALNACT1-204ENST00000517494 CRKLP46109 303 aaKnown RBP20.82■□□□□ 0.92
CSGALNACT1-204ENST00000517494 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
CSGALNACT1-204ENST00000517494 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
CSGALNACT1-204ENST00000517494 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
CSGALNACT1-204ENST00000517494 COL5A3P25940 1745 aaPredicted RBP20.8■□□□□ 0.92
CSGALNACT1-204ENST00000517494 KIAA1551Q9HCM1 1747 aa20.79■□□□□ 0.92
CSGALNACT1-204ENST00000517494 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
CSGALNACT1-204ENST00000517494 ZNF831Q5JPB2 1677 aa20.78■□□□□ 0.92
CSGALNACT1-204ENST00000517494 FKBP8Q14318 412 aa20.78■□□□□ 0.92
CSGALNACT1-204ENST00000517494 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
CSGALNACT1-204ENST00000517494 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
CSGALNACT1-204ENST00000517494 C9orf131Q5VYM1 1079 aa20.77■□□□□ 0.92
CSGALNACT1-204ENST00000517494 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
CSGALNACT1-204ENST00000517494 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.91
CSGALNACT1-204ENST00000517494 TOMM70O94826 608 aa20.76■□□□□ 0.91
CSGALNACT1-204ENST00000517494 DDR1Q08345 913 aa20.76■□□□□ 0.91
CSGALNACT1-204ENST00000517494 KCNA3P22001 575 aa20.75■□□□□ 0.91
CSGALNACT1-204ENST00000517494 IL13P35225 146 aa20.75■□□□□ 0.91
CSGALNACT1-204ENST00000517494 APLP1P51693 650 aa20.75■□□□□ 0.91
CSGALNACT1-204ENST00000517494 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
CSGALNACT1-204ENST00000517494 CHRNA5P30532 468 aa20.74■□□□□ 0.91
CSGALNACT1-204ENST00000517494 DNAJC10Q8IXB1 793 aa20.74■□□□□ 0.91
CSGALNACT1-204ENST00000517494 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
CSGALNACT1-204ENST00000517494 ZPR1O75312 459 aa20.73■□□□□ 0.91
CSGALNACT1-204ENST00000517494 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
CSGALNACT1-204ENST00000517494 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
CSGALNACT1-204ENST00000517494 HMOX1P09601 288 aa20.72■□□□□ 0.91
CSGALNACT1-204ENST00000517494 AKAP4Q5JQC9 854 aa20.72■□□□□ 0.91
CSGALNACT1-204ENST00000517494 RNF181Q9P0P0 153 aa20.72■□□□□ 0.91
CSGALNACT1-204ENST00000517494 TJP1Q07157 1748 aa20.71■□□□□ 0.91
CSGALNACT1-204ENST00000517494 SLC39A6Q13433 755 aa20.71■□□□□ 0.91
CSGALNACT1-204ENST00000517494 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
CSGALNACT1-204ENST00000517494 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
CSGALNACT1-204ENST00000517494 LGR6Q9HBX8 967 aa20.71■□□□□ 0.91
CSGALNACT1-204ENST00000517494 POLRMTO00411 1230 aaKnown RBP20.7■□□□□ 0.9
CSGALNACT1-204ENST00000517494 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
CSGALNACT1-204ENST00000517494 RNMTO43148 476 aaKnown RBP20.68■□□□□ 0.9
CSGALNACT1-204ENST00000517494 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
CSGALNACT1-204ENST00000517494 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
CSGALNACT1-204ENST00000517494 KDM2BQ8NHM5 1336 aa20.67■□□□□ 0.9
CSGALNACT1-204ENST00000517494 CYP19A1P11511 503 aaPredicted RBP20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 TM4SF1P30408 202 aa20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 RBM46Q8TBY0 533 aaKnown RBP20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 ZBTB1Q9Y2K1 713 aa20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 BRCA1P38398 1863 aaKnown RBP20.66■□□□□ 0.9
CSGALNACT1-204ENST00000517494 SCN11AQ9UI33 1791 aa20.65■□□□□ 0.9
CSGALNACT1-204ENST00000517494 COL15A1P39059 1388 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms