RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
SNORA40.14-201ENST00000516543 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
SNORA40.14-201ENST00000516543 RUBCNLQ9H714 662 aa5.78□□□□□ -1.48
SNORA40.14-201ENST00000516543 DOLKQ9UPQ8 538 aa5.78□□□□□ -1.48
SNORA40.14-201ENST00000516543 APBB1O00213 710 aa5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 BCRP11274 1271 aa5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 EIF4G2P78344 907 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 GPAT2Q6NUI2 795 aa5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 C1orf229Q6ZS94 237 aaPredicted RBP5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 SCARF2Q96GP6 870 aaPredicted RBP5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 TRERF1Q96PN7 1200 aa5.77□□□□□ -1.49
SNORA40.14-201ENST00000516543 ABL2P42684 1182 aa5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 SLFNL1Q499Z3 407 aa5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 TMEM214Q6NUQ4 689 aaKnown RBP5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 CHIC2Q9UKJ5 165 aa5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 DNMT3AQ9Y6K1 912 aaPredicted RBP5.76□□□□□ -1.49
SNORA40.14-201ENST00000516543 ITGB2P05107 769 aa5.75□□□□□ -1.49
SNORA40.14-201ENST00000516543 MSX1P28360 303 aa5.75□□□□□ -1.49
SNORA40.14-201ENST00000516543 SCNN1DP51172 638 aa5.75□□□□□ -1.49
SNORA40.14-201ENST00000516543 USP4Q13107 963 aa5.75□□□□□ -1.49
SNORA40.14-201ENST00000516543 NEDD1Q8NHV4 660 aa5.75□□□□□ -1.49
SNORA40.14-201ENST00000516543 A0A1B0GTH6 734 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 SHISA8B8ZZ34 492 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 PRKCSHP14314 528 aaPredicted RBP5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 SNRPNP63162 240 aaKnown RBP5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 TLR1Q15399 786 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 GNASQ5JWF2 1037 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 KANK3Q6NY19 840 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 ENAMQ9NRM1 1142 aa5.74□□□□□ -1.49
SNORA40.14-201ENST00000516543 C2CD2LO14523 706 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 OIP5O43482 229 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 ESCO1Q5FWF5 840 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 PPARGC1BQ86YN6 1023 aaKnown RBP5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 RHBDD1Q8TEB9 315 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 KLRG1Q96E93 195 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 ABHD17AQ96GS6 310 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 CFHR5Q9BXR6 569 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 OXCT2Q9BYC2 517 aaPredicted RBP5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 HCN2Q9UL51 889 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 USP3Q9Y6I4 520 aa5.73□□□□□ -1.49
SNORA40.14-201ENST00000516543 BNIP3LO60238 219 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 INHAP05111 366 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 PLA2G4AP47712 749 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 GDF10P55107 478 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 CTBSQ01459 385 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 MCM6Q14566 821 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 PLPP7Q8NBV4 271 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 DCAF5Q96JK2 942 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 PRM3Q9NNZ6 103 aa5.72□□□□□ -1.49
SNORA40.14-201ENST00000516543 TMEM229AB2RXF0 380 aa5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 PLA2G4EQ3MJ16 856 aa5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 GALNT6Q8NCL4 622 aa5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 NDFIP2Q9NV92 336 aa5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 DNAAF2Q9NVR5 837 aaKnown RBP5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 SERTAD1Q9UHV2 236 aa5.71□□□□□ -1.5
SNORA40.14-201ENST00000516543 CSB-PGBD3P0DP91 1061 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 ATP4AP20648 1035 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 GTF2E1P29083 439 aaPredicted RBP5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 MAP2K3P46734 347 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 ZNF295-AS1Q8N0V1 137 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 PGBD3Q8N328 593 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 BEND7Q8N7W2 519 aaPredicted RBP5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 NSFL1CQ9UNZ2 370 aaKnown RBP5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 COG6Q9Y2V7 657 aa5.7□□□□□ -1.5
SNORA40.14-201ENST00000516543 PHF20L1A8MW92 1017 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 FGFR3P22607 806 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 SMTNP53814 917 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 EFHC2Q5JST6 749 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 EDARADDQ8WWZ3 215 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 AIDAQ96BJ3 306 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 POM121Q96HA1 1249 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 CRISPLD1Q9H336 500 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 PHF24Q9UPV7 400 aa5.69□□□□□ -1.5
SNORA40.14-201ENST00000516543 BMP4P12644 408 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 LBRQ14739 615 aaKnown RBP5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 WASHC4Q2M389 1173 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 MAP7D1Q3KQU3 841 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 TBC1D9Q6ZT07 1266 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 PODNQ7Z5L7 613 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 SIRT1Q96EB6 747 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 ZCCHC2Q9C0B9 1178 aaKnown RBP5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 LRRC4BQ9NT99 713 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 GGA1Q9UJY5 639 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 ATXN7L1Q9ULK2 861 aaPredicted RBP5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 IQSEC3Q9UPP2 1182 aaPredicted RBP5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 PCDHGA11Q9Y5H2 935 aa5.68□□□□□ -1.5
SNORA40.14-201ENST00000516543 IGHA1P01876 353 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 PROCP04070 461 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 COL8A1P27658 744 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 FOXK2Q01167 660 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 SPOCK3Q9BQ16 436 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 SUV39H2Q9H5I1 410 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 PARP3Q9Y6F1 533 aa5.67□□□□□ -1.5
SNORA40.14-201ENST00000516543 A0A1W2PNR3 127 aa5.66□□□□□ -1.5
SNORA40.14-201ENST00000516543 DCDC2BA2VCK2 349 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms