RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 TNS4Q8IZW8 715 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 NKX2-3Q8TAU0 364 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 C8orf37Q96NL8 207 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 PURBQ96QR8 312 aaKnown RBP5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 CITED4Q96RK1 184 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 CHMP3Q9Y3E7 222 aa5.9□□□□□ -1.46
RNU6-27P-201ENST00000516146 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 INHAP05111 366 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 GGCXP38435 758 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 SCNN1DP51172 638 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 ARID5BQ14865 1188 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 EHBP1Q8NDI1 1231 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 CHMP7Q8WUX9 453 aaPredicted RBP5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 OSBPL3Q9H4L5 887 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 CYLDQ9NQC7 956 aa5.89□□□□□ -1.47
RNU6-27P-201ENST00000516146 FSHRP23945 695 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 MPSTP25325 297 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 ZC3H6P61129 1189 aaKnown RBP5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 AAMPQ13685 434 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 TSNAXIP1Q2TAA8 658 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 STAG2Q8N3U4 1231 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 TMC1Q8TDI8 760 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 TSPAN10Q9H1Z9 355 aaPredicted RBP5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 SERTAD1Q9UHV2 236 aa5.88□□□□□ -1.47
RNU6-27P-201ENST00000516146 RECKO95980 971 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 GNRH1P01148 92 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 P4HBP07237 508 aaKnown RBP5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 EPHA4P54764 986 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 MYT1Q01538 1121 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 PDE3BQ13370 1112 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 ABTB2Q8N961 1025 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 ANKLE1Q8NAG6 615 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 DMRTB1Q96MA1 342 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 CDK15Q96Q40 435 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 SLC4A9Q96Q91 983 aa5.87□□□□□ -1.47
RNU6-27P-201ENST00000516146 TREHO43280 583 aa5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 RPIAP49247 311 aa5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 PSMA6P60900 246 aaKnown RBP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 XPCQ01831 940 aaPredicted RBP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 TAGLNQ01995 201 aaKnown RBP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 ZNF784Q8NCA9 323 aaPredicted RBP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 SREK1Q8WXA9 508 aaKnown RBP5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 PRKD2Q9BZL6 878 aa5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 ETNK1Q9HBU6 452 aa5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 TMPRSS4Q9NRS4 437 aa5.86□□□□□ -1.47
RNU6-27P-201ENST00000516146 POTEMA6NI47 508 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 A6NJY4 79 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 PPEF1O14829 653 aaPredicted RBP5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 EIF1AXP47813 144 aaKnown RBP5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 SKOR1P84550 965 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 ATP2B2Q01814 1243 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 KCNC4Q03721 635 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 SLC9A9Q8IVB4 645 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 CCDC116Q8IYX3 515 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 MPNDQ8N594 471 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 NBPF15Q8N660 670 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 DRC1Q96MC2 740 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 MRS2Q9HD23 443 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 PGPEP1Q9NXJ5 209 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 SCHIP1Q9P0W5 487 aaPredicted RBP5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 STIM2Q9P246 746 aa5.85□□□□□ -1.47
RNU6-27P-201ENST00000516146 A0A1W2PRU2 124 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 RNF223E7ERA6 249 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 SCAMP3O14828 347 aaKnown RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 CD2BP2O95400 341 aaKnown RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 STAU1O95793 577 aaKnown RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 LDHBP07195 334 aaKnown RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 MAPK8P45983 427 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 SMTNP53814 917 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 FOXK2Q01167 660 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 PLCB3Q01970 1234 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 NR5A1Q13285 461 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 MTFR1Q15390 333 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 SF3A1Q15459 793 aaKnown RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 C2orf49Q9BVC5 232 aaPredicted RBP5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
RNU6-27P-201ENST00000516146 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 ADH1CP00326 375 aa5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 BRD2P25440 801 aaKnown RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 ERCC5P28715 1186 aaPredicted RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 MRPL58Q14197 206 aaKnown RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 COX20Q5RI15 118 aa5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 PPP1R26Q5T8A7 1209 aaPredicted RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 RC3H1Q5TC82 1133 aaKnown RBP5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 MYO19Q96H55 970 aa5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 SAP130Q9H0E3 1048 aa5.83□□□□□ -1.48
RNU6-27P-201ENST00000516146 FZD6O60353 706 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 LILRA1O75019 489 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 HMGB1P09429 215 aaKnown RBP5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 GRM5P41594 1212 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 USP5P45974 858 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 EHHADHQ08426 723 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 DSC3Q14574 896 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 TLR1Q15399 786 aa5.82□□□□□ -1.48
RNU6-27P-201ENST00000516146 TBCELQ5QJ74 424 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms