RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
RNU4-49P-201ENST00000516080 ETNK1Q9HBU6 452 aa6.73□□□□□ -1.33
RNU4-49P-201ENST00000516080 GPR25O00155 361 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 PHKA2P46019 1235 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 KCNMA1Q12791 1236 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 TLR1Q15399 786 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 PPARGC1BQ86YN6 1023 aaKnown RBP6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 WHAMMQ8TF30 809 aa6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 NSFL1CQ9UNZ2 370 aaKnown RBP6.72□□□□□ -1.33
RNU4-49P-201ENST00000516080 LZTS3O60299 673 aaPredicted RBP6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 ARHGEF15O94989 841 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 INHAP05111 366 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 GDF10P55107 478 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 LBRQ14739 615 aaKnown RBP6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 C4orf17Q53FE4 359 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 PGBD3Q8N328 593 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 NFATC2IPQ8NCF5 419 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 RHBDD1Q8TEB9 315 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
RNU4-49P-201ENST00000516080 UBTFP17480 764 aaKnown RBP6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 SCNN1DP51172 638 aa6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 CFHR5Q9BXR6 569 aa6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 ALG2Q9H553 416 aa6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 GPAMQ9HCL2 828 aa6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 PHF24Q9UPV7 400 aa6.7□□□□□ -1.34
RNU4-49P-201ENST00000516080 IGF1RP08069 1367 aa6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 STAU1O95793 577 aaKnown RBP6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 CELA2BP08218 269 aaPredicted RBP6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 MX2P20592 715 aa6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 MARSP56192 900 aaKnown RBP6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
RNU4-49P-201ENST00000516080 SKIP12755 728 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 MSX1P28360 303 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 SMTNP53814 917 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 EML3Q32P44 896 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 EFHC2Q5JST6 749 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 POM121Q96HA1 1249 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 NIFKQ9BYG3 293 aaKnown RBP6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 NOD1Q9Y239 953 aa6.68□□□□□ -1.34
RNU4-49P-201ENST00000516080 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 BCRP11274 1271 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 RASSF7Q02833 373 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 TBC1D9Q6ZT07 1266 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 C1orf216Q8TAB5 229 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 SCARF2Q96GP6 870 aaPredicted RBP6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 SLC4A9Q96Q91 983 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 RUBCNLQ9H714 662 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 LRRC4BQ9NT99 713 aa6.67□□□□□ -1.34
RNU4-49P-201ENST00000516080 CDK2AP1O14519 115 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 MAP2K3P46734 347 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 PLA2G4AP47712 749 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 GSK3AP49840 483 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 CRISPLD1Q9H336 500 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
RNU4-49P-201ENST00000516080 TMEM229AB2RXF0 380 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 BACH1O14867 736 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 GDF11O95390 407 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 THBS1P07996 1170 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 GTF2IP78347 998 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 TMEM132AQ24JP5 1023 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 ACDQ96AP0 544 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 SERTAD1Q9UHV2 236 aa6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 ATXN7L1Q9ULK2 861 aaPredicted RBP6.65□□□□□ -1.34
RNU4-49P-201ENST00000516080 A6NJY4 79 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 NCOA4Q13772 614 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 UBAP2LQ14157 1087 aaKnown RBP6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 MTFR1Q15390 333 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 NBPF1Q3BBV0 1214 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 KANK3Q6NY19 840 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 FIGNL1Q6PIW4 674 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 AIDAQ96BJ3 306 aa6.64□□□□□ -1.35
RNU4-49P-201ENST00000516080 USP17L5A8MUK1 530 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 IRS1P35568 1242 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 PSME1Q06323 249 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 NLRP8Q86W28 1048 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 NEDD1Q8NHV4 660 aa6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
RNU4-49P-201ENST00000516080 TATP17735 454 aaPredicted RBP6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 PLEKHM2Q8IWE5 1019 aa6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 BEND7Q8N7W2 519 aaPredicted RBP6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 GDF2Q9UK05 429 aaPredicted RBP6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 IQSEC3Q9UPP2 1182 aaPredicted RBP6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
RNU4-49P-201ENST00000516080 POM121CA8CG34 1229 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 OIP5O43482 229 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 ATP4AP20648 1035 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 FGFR3P22607 806 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 ARSJQ5FYB0 599 aaPredicted RBP6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 ZNF295-AS1Q8N0V1 137 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 KLRG1Q96E93 195 aa6.61□□□□□ -1.35
RNU4-49P-201ENST00000516080 ABHD17AQ96GS6 310 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms