RNA–Protein interactions for RNA: ENST00000515653.1

TMCO6-214, Transcript of transmembrane and coiled-coil domains 6, humanhuman

TSL 3

Gene TMCO6, Length 611 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO6-214ENST00000515653 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
TMCO6-214ENST00000515653 CD2APQ9Y5K6 639 aa17.03■□□□□ 0.32
TMCO6-214ENST00000515653 SSFA2P28290 1259 aa17.02■□□□□ 0.32
TMCO6-214ENST00000515653 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
TMCO6-214ENST00000515653 PANK3Q9H999 370 aa17.02■□□□□ 0.32
TMCO6-214ENST00000515653 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
TMCO6-214ENST00000515653 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
TMCO6-214ENST00000515653 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMCO6-214ENST00000515653 TJP1Q07157 1748 aa17.01■□□□□ 0.31
TMCO6-214ENST00000515653 ADCY9O60503 1353 aa17.01■□□□□ 0.31
TMCO6-214ENST00000515653 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
TMCO6-214ENST00000515653 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
TMCO6-214ENST00000515653 GRIN3BO60391 1043 aa17■□□□□ 0.31
TMCO6-214ENST00000515653 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
TMCO6-214ENST00000515653 ATP6V1AP38606 617 aa17■□□□□ 0.31
TMCO6-214ENST00000515653 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
TMCO6-214ENST00000515653 ATP10DQ9P241 1426 aa16.99■□□□□ 0.31
TMCO6-214ENST00000515653 GNPATO15228 680 aa16.99■□□□□ 0.31
TMCO6-214ENST00000515653 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
TMCO6-214ENST00000515653 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
TMCO6-214ENST00000515653 BRCA1P38398 1863 aaKnown RBP16.98■□□□□ 0.31
TMCO6-214ENST00000515653 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
TMCO6-214ENST00000515653 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
TMCO6-214ENST00000515653 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
TMCO6-214ENST00000515653 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.31
TMCO6-214ENST00000515653 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
TMCO6-214ENST00000515653 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
TMCO6-214ENST00000515653 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
TMCO6-214ENST00000515653 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
TMCO6-214ENST00000515653 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
TMCO6-214ENST00000515653 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
TMCO6-214ENST00000515653 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
TMCO6-214ENST00000515653 MMP10P09238 476 aa16.92■□□□□ 0.3
TMCO6-214ENST00000515653 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
TMCO6-214ENST00000515653 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
TMCO6-214ENST00000515653 IL13P35225 146 aa16.91■□□□□ 0.3
TMCO6-214ENST00000515653 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
TMCO6-214ENST00000515653 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
TMCO6-214ENST00000515653 MRC1P22897 1456 aa16.91■□□□□ 0.3
TMCO6-214ENST00000515653 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
TMCO6-214ENST00000515653 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
TMCO6-214ENST00000515653 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
TMCO6-214ENST00000515653 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
TMCO6-214ENST00000515653 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
TMCO6-214ENST00000515653 GYS1P13807 737 aa16.89■□□□□ 0.29
TMCO6-214ENST00000515653 CABP4P57796 275 aa16.89■□□□□ 0.29
TMCO6-214ENST00000515653 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
TMCO6-214ENST00000515653 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
TMCO6-214ENST00000515653 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
TMCO6-214ENST00000515653 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
TMCO6-214ENST00000515653 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
TMCO6-214ENST00000515653 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
TMCO6-214ENST00000515653 ADRA2BP18089 450 aa16.87■□□□□ 0.29
TMCO6-214ENST00000515653 MTHFSP49914 203 aa16.87■□□□□ 0.29
TMCO6-214ENST00000515653 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
TMCO6-214ENST00000515653 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
TMCO6-214ENST00000515653 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
TMCO6-214ENST00000515653 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
TMCO6-214ENST00000515653 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
TMCO6-214ENST00000515653 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
TMCO6-214ENST00000515653 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
TMCO6-214ENST00000515653 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
TMCO6-214ENST00000515653 GPBP1L1Q9HC44 474 aaPredicted RBP16.85■□□□□ 0.29
TMCO6-214ENST00000515653 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
TMCO6-214ENST00000515653 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
TMCO6-214ENST00000515653 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
TMCO6-214ENST00000515653 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
TMCO6-214ENST00000515653 PER1O15534 1290 aaPredicted RBP16.83■□□□□ 0.28
TMCO6-214ENST00000515653 RFC4P35249 363 aa16.83■□□□□ 0.28
TMCO6-214ENST00000515653 TGFB2P61812 414 aa16.83■□□□□ 0.28
TMCO6-214ENST00000515653 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
TMCO6-214ENST00000515653 NRXN2Q9P2S2 1712 aa16.83■□□□□ 0.28
TMCO6-214ENST00000515653 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
TMCO6-214ENST00000515653 DPEP1P16444 411 aa16.82■□□□□ 0.28
TMCO6-214ENST00000515653 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
TMCO6-214ENST00000515653 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
TMCO6-214ENST00000515653 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
TMCO6-214ENST00000515653 KIF3CO14782 793 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 HMOX1P09601 288 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 KCNA3P22001 575 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 DDR1Q08345 913 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 FKBP8Q14318 412 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 CCDC87Q9NVE4 849 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
TMCO6-214ENST00000515653 DNAJC10Q8IXB1 793 aa16.8■□□□□ 0.28
TMCO6-214ENST00000515653 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
TMCO6-214ENST00000515653 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
TMCO6-214ENST00000515653 SBF1O95248 1867 aa16.78■□□□□ 0.28
TMCO6-214ENST00000515653 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
TMCO6-214ENST00000515653 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
TMCO6-214ENST00000515653 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
TMCO6-214ENST00000515653 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
TMCO6-214ENST00000515653 SCN7AQ01118 1682 aa16.76■□□□□ 0.27
TMCO6-214ENST00000515653 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
TMCO6-214ENST00000515653 FCHSD2O94868 740 aa16.76■□□□□ 0.27
TMCO6-214ENST00000515653 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
TMCO6-214ENST00000515653 HSPA6P17066 643 aa16.76■□□□□ 0.27
TMCO6-214ENST00000515653 TM4SF1P30408 202 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms