RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
TRIM41-207ENST00000515223 MKNK2Q9HBH9 465 aa18.82■□□□□ 0.6
TRIM41-207ENST00000515223 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
TRIM41-207ENST00000515223 PHF8Q9UPP1 1060 aa18.82■□□□□ 0.6
TRIM41-207ENST00000515223 ZSCAN31Q96LW9 406 aaPredicted RBP18.81■□□□□ 0.6
TRIM41-207ENST00000515223 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
TRIM41-207ENST00000515223 NOM1Q5C9Z4 860 aaKnown RBP18.81■□□□□ 0.6
TRIM41-207ENST00000515223 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
TRIM41-207ENST00000515223 DZIP1Q86YF9 867 aaKnown RBP18.81■□□□□ 0.6
TRIM41-207ENST00000515223 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
TRIM41-207ENST00000515223 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
TRIM41-207ENST00000515223 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
TRIM41-207ENST00000515223 CIZ1Q9ULV3 898 aaPredicted RBP18.8■□□□□ 0.6
TRIM41-207ENST00000515223 SCLT1Q96NL6 688 aa18.8■□□□□ 0.6
TRIM41-207ENST00000515223 PPP4R3AQ6IN85 833 aa18.8■□□□□ 0.6
TRIM41-207ENST00000515223 IL1RAPL2Q9NP60 686 aa18.8■□□□□ 0.6
TRIM41-207ENST00000515223 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 MTERF4Q7Z6M4 381 aaKnown RBP18.79■□□□□ 0.6
TRIM41-207ENST00000515223 PDRG1Q9NUG6 133 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
TRIM41-207ENST00000515223 FOXO3O43524 673 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 WDR78Q5VTH9 848 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
TRIM41-207ENST00000515223 CFAP45Q9UL16 551 aa18.79■□□□□ 0.6
TRIM41-207ENST00000515223 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
TRIM41-207ENST00000515223 IFIT5Q13325 482 aaKnown RBP18.78■□□□□ 0.6
TRIM41-207ENST00000515223 TNMDQ9H2S6 317 aa18.78■□□□□ 0.6
TRIM41-207ENST00000515223 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
TRIM41-207ENST00000515223 SSFA2P28290 1259 aa18.78■□□□□ 0.6
TRIM41-207ENST00000515223 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
TRIM41-207ENST00000515223 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
TRIM41-207ENST00000515223 CEP131Q9UPN4 1083 aa18.78■□□□□ 0.6
TRIM41-207ENST00000515223 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
TRIM41-207ENST00000515223 SYCE3A1L190 88 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 POTEJP0CG39 1038 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 KIF1BPQ96EK5 621 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 SEPT11Q9NVA2 429 aaKnown RBP18.77■□□□□ 0.6
TRIM41-207ENST00000515223 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.6
TRIM41-207ENST00000515223 SEPT7Q16181 437 aaKnown RBP18.77■□□□□ 0.6
TRIM41-207ENST00000515223 CEP57L1Q8IYX8 460 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 SSH1Q8WYL5 1049 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 CD109Q6YHK3 1445 aa18.77■□□□□ 0.6
TRIM41-207ENST00000515223 MAP3K12Q12852 859 aa18.77■□□□□ 0.59
TRIM41-207ENST00000515223 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.59
TRIM41-207ENST00000515223 CCDC181Q5TID7 509 aa18.77■□□□□ 0.59
TRIM41-207ENST00000515223 ZSCAN30Q86W11 494 aa18.77■□□□□ 0.59
TRIM41-207ENST00000515223 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.59
TRIM41-207ENST00000515223 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.59
TRIM41-207ENST00000515223 CUL7Q14999 1698 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 TMPOP42166 694 aaKnown RBP18.76■□□□□ 0.59
TRIM41-207ENST00000515223 IQGAP2Q13576 1575 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 MINDY4BA8MYZ0 360 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 SLC5A1P13866 664 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
TRIM41-207ENST00000515223 SKIDA1Q1XH10 827 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
TRIM41-207ENST00000515223 CHMP4BP1P59074 171 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 CCDC196A0A1B0GTZ2 297 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 ZNF444Q8N0Y2 327 aaPredicted RBP18.75■□□□□ 0.59
TRIM41-207ENST00000515223 MYD88Q99836 296 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 NAPBQ9H115 298 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 TBC1D32Q96NH3 1257 aa18.75■□□□□ 0.59
TRIM41-207ENST00000515223 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
TRIM41-207ENST00000515223 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
TRIM41-207ENST00000515223 RAB11FIP3O75154 756 aa18.74■□□□□ 0.59
TRIM41-207ENST00000515223 TMEM87AQ8NBN3 555 aa18.74■□□□□ 0.59
TRIM41-207ENST00000515223 C6orf229H3BNL8 230 aa18.74■□□□□ 0.59
TRIM41-207ENST00000515223 CUL5Q93034 780 aa18.74■□□□□ 0.59
TRIM41-207ENST00000515223 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
TRIM41-207ENST00000515223 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 SPATA32Q96LK8 384 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 GOLGA6L10A6NI86 522 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
TRIM41-207ENST00000515223 ANKRD62A6NC57 917 aa18.72■□□□□ 0.59
TRIM41-207ENST00000515223 EHMT1Q9H9B1 1298 aa18.72■□□□□ 0.59
TRIM41-207ENST00000515223 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
TRIM41-207ENST00000515223 CETN2P41208 172 aa18.72■□□□□ 0.59
TRIM41-207ENST00000515223 MCM10Q7L590 875 aa18.71■□□□□ 0.59
TRIM41-207ENST00000515223 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
TRIM41-207ENST00000515223 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
TRIM41-207ENST00000515223 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
TRIM41-207ENST00000515223 AXDND1Q5T1B0 1012 aaPredicted RBP18.71■□□□□ 0.59
TRIM41-207ENST00000515223 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
TRIM41-207ENST00000515223 LDHCP07864 332 aa18.71■□□□□ 0.58
TRIM41-207ENST00000515223 H0YHG0 523 aa18.7■□□□□ 0.58
TRIM41-207ENST00000515223 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 TRIM27P14373 513 aa18.7■□□□□ 0.58
TRIM41-207ENST00000515223 RNF41Q9H4P4 317 aaPredicted RBP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 HMGN5P82970 282 aaKnown RBP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 CDC5LQ99459 802 aaKnown RBP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms