RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 CTCFP49711 727 aaPredicted RBP17.02■□□□□ 0.32
SMAD5-210ENST00000515005 TMF1P82094 1093 aa17.02■□□□□ 0.32
SMAD5-210ENST00000515005 ITPK1Q13572 414 aa17.02■□□□□ 0.32
SMAD5-210ENST00000515005 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
SMAD5-210ENST00000515005 PIGBQ92521 554 aa17.02■□□□□ 0.32
SMAD5-210ENST00000515005 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 FBLN1P23142 703 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 LBX1P52954 281 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
SMAD5-210ENST00000515005 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
SMAD5-210ENST00000515005 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
SMAD5-210ENST00000515005 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SMAD5-210ENST00000515005 AMPHP49418 695 aa16.99■□□□□ 0.31
SMAD5-210ENST00000515005 RASSF7Q02833 373 aa16.99■□□□□ 0.31
SMAD5-210ENST00000515005 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SMAD5-210ENST00000515005 ZC3H4Q9UPT8 1303 aaKnown RBP16.98■□□□□ 0.31
SMAD5-210ENST00000515005 POTECB2RU33 542 aa16.98■□□□□ 0.31
SMAD5-210ENST00000515005 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
SMAD5-210ENST00000515005 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
SMAD5-210ENST00000515005 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
SMAD5-210ENST00000515005 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
SMAD5-210ENST00000515005 ATP6V1AP38606 617 aa16.97■□□□□ 0.31
SMAD5-210ENST00000515005 RGS19P49795 217 aa16.97■□□□□ 0.31
SMAD5-210ENST00000515005 CNTNAP1P78357 1384 aa16.97■□□□□ 0.31
SMAD5-210ENST00000515005 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
SMAD5-210ENST00000515005 GYS1P13807 737 aa16.96■□□□□ 0.31
SMAD5-210ENST00000515005 CHRNA5P30532 468 aa16.96■□□□□ 0.31
SMAD5-210ENST00000515005 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
SMAD5-210ENST00000515005 TMC1Q8TDI8 760 aa16.96■□□□□ 0.31
SMAD5-210ENST00000515005 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.31
SMAD5-210ENST00000515005 CCDC85CA6NKD9 419 aa16.95■□□□□ 0.3
SMAD5-210ENST00000515005 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
SMAD5-210ENST00000515005 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
SMAD5-210ENST00000515005 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
SMAD5-210ENST00000515005 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
SMAD5-210ENST00000515005 WBP1LQ9NX94 342 aa16.94■□□□□ 0.3
SMAD5-210ENST00000515005 PDE4DIPQ5VU43 2346 aa16.94■□□□□ 0.3
SMAD5-210ENST00000515005 LMNB1P20700 586 aa16.93■□□□□ 0.3
SMAD5-210ENST00000515005 VEGFBP49765 207 aa16.93■□□□□ 0.3
SMAD5-210ENST00000515005 TIAM2Q8IVF5 1701 aa16.93■□□□□ 0.3
SMAD5-210ENST00000515005 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
SMAD5-210ENST00000515005 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
SMAD5-210ENST00000515005 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
SMAD5-210ENST00000515005 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
SMAD5-210ENST00000515005 RFC4P35249 363 aa16.9■□□□□ 0.3
SMAD5-210ENST00000515005 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 ADRA2BP18089 450 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 DDR1Q08345 913 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
SMAD5-210ENST00000515005 NKX1-1Q15270 411 aaPredicted RBP16.89■□□□□ 0.29
SMAD5-210ENST00000515005 COG3Q96JB2 828 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
SMAD5-210ENST00000515005 ATG3Q9NT62 314 aa16.88■□□□□ 0.29
SMAD5-210ENST00000515005 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
SMAD5-210ENST00000515005 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
SMAD5-210ENST00000515005 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
SMAD5-210ENST00000515005 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
SMAD5-210ENST00000515005 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
SMAD5-210ENST00000515005 TNRC18O15417 2968 aaPredicted RBP16.86■□□□□ 0.29
SMAD5-210ENST00000515005 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
SMAD5-210ENST00000515005 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SMAD5-210ENST00000515005 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
SMAD5-210ENST00000515005 KDRP35968 1356 aa16.86■□□□□ 0.29
SMAD5-210ENST00000515005 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
SMAD5-210ENST00000515005 DPY19L2Q6NUT2 758 aa16.85■□□□□ 0.29
SMAD5-210ENST00000515005 SRP68Q9UHB9 627 aaKnown RBP16.85■□□□□ 0.29
SMAD5-210ENST00000515005 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
SMAD5-210ENST00000515005 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
SMAD5-210ENST00000515005 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
SMAD5-210ENST00000515005 NFKBIEO00221 500 aa16.83■□□□□ 0.28
SMAD5-210ENST00000515005 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
SMAD5-210ENST00000515005 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
SMAD5-210ENST00000515005 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
SMAD5-210ENST00000515005 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
SMAD5-210ENST00000515005 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
SMAD5-210ENST00000515005 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
SMAD5-210ENST00000515005 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
SMAD5-210ENST00000515005 INSRP06213 1382 aa16.8■□□□□ 0.28
SMAD5-210ENST00000515005 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
SMAD5-210ENST00000515005 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
SMAD5-210ENST00000515005 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
SMAD5-210ENST00000515005 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SMAD5-210ENST00000515005 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
SMAD5-210ENST00000515005 DDNO94850 711 aaPredicted RBP16.78■□□□□ 0.28
SMAD5-210ENST00000515005 ITGBL1O95965 494 aaPredicted RBP16.78■□□□□ 0.28
SMAD5-210ENST00000515005 TM4SF1P30408 202 aa16.78■□□□□ 0.28
SMAD5-210ENST00000515005 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
SMAD5-210ENST00000515005 TTLL6Q8N841 843 aa16.78■□□□□ 0.28
SMAD5-210ENST00000515005 DEFB115Q30KQ5 88 aa16.77■□□□□ 0.28
SMAD5-210ENST00000515005 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
SMAD5-210ENST00000515005 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.27
SMAD5-210ENST00000515005 WDR33Q9C0J8 1336 aaKnown RBP16.76■□□□□ 0.27
SMAD5-210ENST00000515005 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
SMAD5-210ENST00000515005 PHKG2P15735 406 aa16.76■□□□□ 0.27
SMAD5-210ENST00000515005 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms