RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 SIRT2Q8IXJ6 389 aa27.55■■■□□ 2
KLF3-203ENST00000514033 EIF4A1P60842 406 aaKnown RBP27.55■■■□□ 2
KLF3-203ENST00000514033 SOS2Q07890 1332 aaPredicted RBP27.54■■■□□ 2
KLF3-203ENST00000514033 RAPGEF4Q8WZA2 1011 aa27.54■■■□□ 2
KLF3-203ENST00000514033 CHRNA2Q15822 529 aa27.53■■■□□ 2
KLF3-203ENST00000514033 ERICH6Q7L0X2 663 aa27.53■■■□□ 2
KLF3-203ENST00000514033 NOP58Q9Y2X3 529 aaKnown RBP27.53■■■□□ 2
KLF3-203ENST00000514033 CCT4P50991 539 aaKnown RBP27.53■■■□□ 2
KLF3-203ENST00000514033 NECTIN2Q92692 538 aa27.53■■■□□ 2
KLF3-203ENST00000514033 BTBD11A6QL63 1104 aa27.52■■■□□ 2
KLF3-203ENST00000514033 HOXB7P09629 217 aa27.52■■■□□ 2
KLF3-203ENST00000514033 FLIIQ13045 1269 aa27.52■■■□□ 2
KLF3-203ENST00000514033 CSB-PGBD3P0DP91 1061 aa27.51■■□□□ 1.99
KLF3-203ENST00000514033 HDGFL1Q5TGJ6 251 aa27.51■■□□□ 1.99
KLF3-203ENST00000514033 CHD1LQ86WJ1 897 aa27.51■■□□□ 1.99
KLF3-203ENST00000514033 F6X3S4 739 aa27.5■■□□□ 1.99
KLF3-203ENST00000514033 TATP17735 454 aaPredicted RBP27.5■■□□□ 1.99
KLF3-203ENST00000514033 ADAMTS7Q9UKP4 1686 aa27.5■■□□□ 1.99
KLF3-203ENST00000514033 SLC4A10Q6U841 1118 aa27.49■■□□□ 1.99
KLF3-203ENST00000514033 ZBTB47Q9UFB7 747 aaPredicted RBP27.49■■□□□ 1.99
KLF3-203ENST00000514033 CHMP4AQ9BY43 222 aa27.49■■□□□ 1.99
KLF3-203ENST00000514033 PLEKHG2Q9H7P9 1386 aa27.49■■□□□ 1.99
KLF3-203ENST00000514033 ATP10DQ9P241 1426 aa27.48■■□□□ 1.99
KLF3-203ENST00000514033 KCNQ3O43525 872 aa27.48■■□□□ 1.99
KLF3-203ENST00000514033 FKBP5Q13451 457 aaPredicted RBP27.48■■□□□ 1.99
KLF3-203ENST00000514033 ANKRD44Q8N8A2 993 aa27.48■■□□□ 1.99
KLF3-203ENST00000514033 MEIS3Q99687 375 aa27.48■■□□□ 1.99
KLF3-203ENST00000514033 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
KLF3-203ENST00000514033 RPAP2Q8IXW5 612 aaPredicted RBP27.47■■□□□ 1.99
KLF3-203ENST00000514033 LNPKQ9C0E8 428 aa27.47■■□□□ 1.99
KLF3-203ENST00000514033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
KLF3-203ENST00000514033 MEGF6O75095 1541 aa27.47■■□□□ 1.99
KLF3-203ENST00000514033 SPG7Q9UQ90 795 aa27.47■■□□□ 1.99
KLF3-203ENST00000514033 ANKRD45Q5TZF3 282 aa27.46■■□□□ 1.99
KLF3-203ENST00000514033 DDRGK1Q96HY6 314 aa27.46■■□□□ 1.99
KLF3-203ENST00000514033 SIPA1L3O60292 1781 aaPredicted RBP27.44■■□□□ 1.98
KLF3-203ENST00000514033 CEP85Q6P2H3 762 aa27.44■■□□□ 1.98
KLF3-203ENST00000514033 PXDNLA1KZ92 1463 aa27.43■■□□□ 1.98
KLF3-203ENST00000514033 EIF2S2P20042 333 aaKnown RBP27.42■■□□□ 1.98
KLF3-203ENST00000514033 DCTPP1Q9H773 170 aa27.42■■□□□ 1.98
KLF3-203ENST00000514033 SEC24BO95487 1268 aa27.42■■□□□ 1.98
KLF3-203ENST00000514033 PHKG2P15735 406 aa27.42■■□□□ 1.98
KLF3-203ENST00000514033 PRDM11Q9NQV5 511 aa27.42■■□□□ 1.98
KLF3-203ENST00000514033 HEG1Q9ULI3 1381 aa27.4■■□□□ 1.98
KLF3-203ENST00000514033 NHSL1Q5SYE7 1610 aa27.4■■□□□ 1.98
KLF3-203ENST00000514033 KDM6AO15550 1401 aaPredicted RBP27.4■■□□□ 1.98
KLF3-203ENST00000514033 PHAXQ9H814 394 aaKnown RBP27.4■■□□□ 1.98
KLF3-203ENST00000514033 N4BP2Q86UW6 1770 aaPredicted RBP27.39■■□□□ 1.98
KLF3-203ENST00000514033 UBAP1LF5GYI3 381 aa27.39■■□□□ 1.98
KLF3-203ENST00000514033 IFNL2Q8IZJ0 200 aa27.39■■□□□ 1.98
KLF3-203ENST00000514033 CHPF2Q9P2E5 772 aa27.38■■□□□ 1.97
KLF3-203ENST00000514033 PKD1L3Q7Z443 1732 aa27.38■■□□□ 1.97
KLF3-203ENST00000514033 ABCA3Q99758 1704 aa27.38■■□□□ 1.97
KLF3-203ENST00000514033 ROBO1Q9Y6N7 1651 aa27.38■■□□□ 1.97
KLF3-203ENST00000514033 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
KLF3-203ENST00000514033 GIGYF1O75420 1035 aaPredicted RBP27.37■■□□□ 1.97
KLF3-203ENST00000514033 WDR17Q8IZU2 1322 aa27.36■■□□□ 1.97
KLF3-203ENST00000514033 GNAI2P04899 355 aa27.36■■□□□ 1.97
KLF3-203ENST00000514033 GNAI3P08754 354 aa27.36■■□□□ 1.97
KLF3-203ENST00000514033 SLC52A2Q9HAB3 445 aa27.36■■□□□ 1.97
KLF3-203ENST00000514033 HMMRO75330 724 aa27.34■■□□□ 1.97
KLF3-203ENST00000514033 TOM1O60784 492 aa27.34■■□□□ 1.97
KLF3-203ENST00000514033 DBF4Q9UBU7 674 aaPredicted RBP27.34■■□□□ 1.97
KLF3-203ENST00000514033 COL5A2P05997 1499 aaPredicted RBP27.33■■□□□ 1.97
KLF3-203ENST00000514033 CYP27B1O15528 508 aa27.33■■□□□ 1.97
KLF3-203ENST00000514033 DCAF5Q96JK2 942 aa27.33■■□□□ 1.97
KLF3-203ENST00000514033 UPF2Q9HAU5 1272 aaKnown RBP27.33■■□□□ 1.97
KLF3-203ENST00000514033 PIP4K2BP78356 416 aa27.32■■□□□ 1.96
KLF3-203ENST00000514033 HSP90AB1P08238 724 aaKnown RBP27.32■■□□□ 1.96
KLF3-203ENST00000514033 BMP2KLQ5H9B9 411 aa27.32■■□□□ 1.96
KLF3-203ENST00000514033 MRC1P22897 1456 aa27.31■■□□□ 1.96
KLF3-203ENST00000514033 TOM1L2Q6ZVM7 507 aa27.31■■□□□ 1.96
KLF3-203ENST00000514033 ZNF790Q6PG37 636 aa27.3■■□□□ 1.96
KLF3-203ENST00000514033 NFATC2IPQ8NCF5 419 aa27.3■■□□□ 1.96
KLF3-203ENST00000514033 PARP4Q9UKK3 1724 aaKnown RBP27.29■■□□□ 1.96
KLF3-203ENST00000514033 SRCIN1Q9C0H9 1055 aa27.29■■□□□ 1.96
KLF3-203ENST00000514033 ANXA1P04083 346 aa27.28■■□□□ 1.96
KLF3-203ENST00000514033 DNAAF4Q8WXU2 420 aa27.28■■□□□ 1.96
KLF3-203ENST00000514033 USP44Q9H0E7 712 aa27.28■■□□□ 1.96
KLF3-203ENST00000514033 PRAMEF22A3QJZ6 481 aa27.27■■□□□ 1.96
KLF3-203ENST00000514033 PI4KAP2A4QPH2 592 aa27.27■■□□□ 1.96
KLF3-203ENST00000514033 SLC39A6Q13433 755 aa27.27■■□□□ 1.96
KLF3-203ENST00000514033 PI4KAP1Q8N8J0 262 aa27.27■■□□□ 1.96
KLF3-203ENST00000514033 TBC1D32Q96NH3 1257 aa27.26■■□□□ 1.95
KLF3-203ENST00000514033 CARD10Q9BWT7 1032 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 ADCY9O60503 1353 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
KLF3-203ENST00000514033 ATP8B2P98198 1209 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 BEND3Q5T5X7 828 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 PLEKHM2Q8IWE5 1019 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 HYPKQ9NX55 129 aa27.25■■□□□ 1.95
KLF3-203ENST00000514033 PROSER3Q2NL68 480 aa27.24■■□□□ 1.95
KLF3-203ENST00000514033 LRRFIP2Q9Y608 721 aaKnown RBP27.24■■□□□ 1.95
KLF3-203ENST00000514033 ZCRB1Q8TBF4 217 aaKnown RBP27.23■■□□□ 1.95
KLF3-203ENST00000514033 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
KLF3-203ENST00000514033 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
KLF3-203ENST00000514033 DDX21Q9NR30 783 aaKnown RBP eCLIP27.23■■□□□ 1.95
KLF3-203ENST00000514033 CABP4P57796 275 aa27.21■■□□□ 1.95
KLF3-203ENST00000514033 DAXXQ9UER7 740 aaPredicted RBP27.21■■□□□ 1.95
KLF3-203ENST00000514033 IL2RBP14784 551 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms