RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
LPCAT1-205ENST00000513757 MMP10P09238 476 aa13.52□□□□□ -0.25
LPCAT1-205ENST00000513757 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
LPCAT1-205ENST00000513757 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
LPCAT1-205ENST00000513757 KDRP35968 1356 aa13.52□□□□□ -0.25
LPCAT1-205ENST00000513757 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
LPCAT1-205ENST00000513757 KIF3CO14782 793 aa13.51□□□□□ -0.25
LPCAT1-205ENST00000513757 ADRA2BP18089 450 aa13.51□□□□□ -0.25
LPCAT1-205ENST00000513757 TGFB2P61812 414 aa13.51□□□□□ -0.25
LPCAT1-205ENST00000513757 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
LPCAT1-205ENST00000513757 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
LPCAT1-205ENST00000513757 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
LPCAT1-205ENST00000513757 C10orf71Q711Q0 1435 aa13.5□□□□□ -0.25
LPCAT1-205ENST00000513757 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
LPCAT1-205ENST00000513757 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
LPCAT1-205ENST00000513757 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
LPCAT1-205ENST00000513757 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
LPCAT1-205ENST00000513757 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
LPCAT1-205ENST00000513757 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
LPCAT1-205ENST00000513757 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
LPCAT1-205ENST00000513757 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
LPCAT1-205ENST00000513757 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
LPCAT1-205ENST00000513757 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
LPCAT1-205ENST00000513757 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
LPCAT1-205ENST00000513757 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
LPCAT1-205ENST00000513757 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
LPCAT1-205ENST00000513757 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
LPCAT1-205ENST00000513757 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 GYS1P13807 737 aa13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 APLP1P51693 650 aa13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
LPCAT1-205ENST00000513757 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
LPCAT1-205ENST00000513757 TOMM70O94826 608 aa13.45□□□□□ -0.26
LPCAT1-205ENST00000513757 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
LPCAT1-205ENST00000513757 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
LPCAT1-205ENST00000513757 RFC4P35249 363 aa13.44□□□□□ -0.26
LPCAT1-205ENST00000513757 PARP3Q9Y6F1 533 aa13.44□□□□□ -0.26
LPCAT1-205ENST00000513757 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
LPCAT1-205ENST00000513757 FCHSD2O94868 740 aa13.43□□□□□ -0.26
LPCAT1-205ENST00000513757 DPEP1P16444 411 aa13.43□□□□□ -0.26
LPCAT1-205ENST00000513757 CABP4P57796 275 aa13.43□□□□□ -0.26
LPCAT1-205ENST00000513757 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
LPCAT1-205ENST00000513757 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
LPCAT1-205ENST00000513757 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
LPCAT1-205ENST00000513757 KCNA3P22001 575 aa13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 MTHFSP49914 203 aa13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 NMRK2Q9NPI5 230 aa13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
LPCAT1-205ENST00000513757 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 DNAJC5GQ8N7S2 189 aa13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 TJP1Q07157 1748 aa13.39□□□□□ -0.27
LPCAT1-205ENST00000513757 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
LPCAT1-205ENST00000513757 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
LPCAT1-205ENST00000513757 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 WDR90Q96KV7 1748 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 DDR1Q08345 913 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 FSTL1Q12841 308 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 FKBP8Q14318 412 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 PANK3Q9H999 370 aa13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
LPCAT1-205ENST00000513757 MORC1Q86VD1 984 aa13.36□□□□□ -0.27
LPCAT1-205ENST00000513757 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
LPCAT1-205ENST00000513757 SBF1O95248 1867 aa13.36□□□□□ -0.27
LPCAT1-205ENST00000513757 TM4SF1P30408 202 aa13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 INTS5Q6P9B9 1019 aaKnown RBP13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
LPCAT1-205ENST00000513757 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
LPCAT1-205ENST00000513757 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
LPCAT1-205ENST00000513757 AKAP4Q5JQC9 854 aa13.34□□□□□ -0.27
LPCAT1-205ENST00000513757 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
LPCAT1-205ENST00000513757 ZPR1O75312 459 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 CHRNA5P30532 468 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 IL13P35225 146 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 KLRG1Q96E93 195 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 MRC1P22897 1456 aa13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
LPCAT1-205ENST00000513757 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
LPCAT1-205ENST00000513757 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
LPCAT1-205ENST00000513757 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
LPCAT1-205ENST00000513757 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms