RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 FLAD1Q8NFF5 587 aa18.79■□□□□ 0.6
ABCC3-212ENST00000513511 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
ABCC3-212ENST00000513511 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
ABCC3-212ENST00000513511 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
ABCC3-212ENST00000513511 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
ABCC3-212ENST00000513511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.76■□□□□ 0.59
ABCC3-212ENST00000513511 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
ABCC3-212ENST00000513511 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
ABCC3-212ENST00000513511 ATG3Q9NT62 314 aa18.76■□□□□ 0.59
ABCC3-212ENST00000513511 GNPATO15228 680 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
ABCC3-212ENST00000513511 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 ITPK1Q13572 414 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 AMOTQ4VCS5 1084 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 C1orf141Q5JVX7 400 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
ABCC3-212ENST00000513511 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
ABCC3-212ENST00000513511 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
ABCC3-212ENST00000513511 IL13P35225 146 aa18.74■□□□□ 0.59
ABCC3-212ENST00000513511 CABP4P57796 275 aa18.74■□□□□ 0.59
ABCC3-212ENST00000513511 CHD4Q14839 1912 aa18.74■□□□□ 0.59
ABCC3-212ENST00000513511 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
ABCC3-212ENST00000513511 ERVV-2B6SEH9 535 aa18.72■□□□□ 0.59
ABCC3-212ENST00000513511 SSFA2P28290 1259 aa18.72■□□□□ 0.59
ABCC3-212ENST00000513511 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
ABCC3-212ENST00000513511 ZNF784Q8NCA9 323 aaPredicted RBP18.71■□□□□ 0.59
ABCC3-212ENST00000513511 HMOX1P09601 288 aa18.7■□□□□ 0.58
ABCC3-212ENST00000513511 KDRP35968 1356 aa18.69■□□□□ 0.58
ABCC3-212ENST00000513511 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
ABCC3-212ENST00000513511 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
ABCC3-212ENST00000513511 YBX3P16989 372 aaKnown RBP eCLIP18.68■□□□□ 0.58
ABCC3-212ENST00000513511 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
ABCC3-212ENST00000513511 SLC4A9Q96Q91 983 aa18.68■□□□□ 0.58
ABCC3-212ENST00000513511 RALBP1Q15311 655 aa18.67■□□□□ 0.58
ABCC3-212ENST00000513511 NFATC2IPQ8NCF5 419 aa18.67■□□□□ 0.58
ABCC3-212ENST00000513511 RTCBQ9Y3I0 505 aaKnown RBP18.67■□□□□ 0.58
ABCC3-212ENST00000513511 CD2APQ9Y5K6 639 aa18.67■□□□□ 0.58
ABCC3-212ENST00000513511 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
ABCC3-212ENST00000513511 U2SURPO15042 1029 aaKnown RBP18.65■□□□□ 0.58
ABCC3-212ENST00000513511 TRAPPC3LQ5T215 181 aa18.65■□□□□ 0.58
ABCC3-212ENST00000513511 SCN11AQ9UI33 1791 aa18.64■□□□□ 0.57
ABCC3-212ENST00000513511 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
ABCC3-212ENST00000513511 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
ABCC3-212ENST00000513511 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
ABCC3-212ENST00000513511 MMP10P09238 476 aa18.62■□□□□ 0.57
ABCC3-212ENST00000513511 MYBBP1AQ9BQG0 1328 aaKnown RBP18.62■□□□□ 0.57
ABCC3-212ENST00000513511 CNTNAP4Q9C0A0 1308 aa18.61■□□□□ 0.57
ABCC3-212ENST00000513511 RFC4P35249 363 aa18.61■□□□□ 0.57
ABCC3-212ENST00000513511 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
ABCC3-212ENST00000513511 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
ABCC3-212ENST00000513511 LGR6Q9HBX8 967 aa18.61■□□□□ 0.57
ABCC3-212ENST00000513511 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
ABCC3-212ENST00000513511 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
ABCC3-212ENST00000513511 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
ABCC3-212ENST00000513511 MTHFSDQ2M296 383 aaKnown RBP18.59■□□□□ 0.57
ABCC3-212ENST00000513511 RC3H1Q5TC82 1133 aaKnown RBP18.59■□□□□ 0.57
ABCC3-212ENST00000513511 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
ABCC3-212ENST00000513511 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
ABCC3-212ENST00000513511 TJP1Q07157 1748 aa18.59■□□□□ 0.57
ABCC3-212ENST00000513511 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
ABCC3-212ENST00000513511 C4AP0C0L4 1744 aa18.58■□□□□ 0.57
ABCC3-212ENST00000513511 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
ABCC3-212ENST00000513511 RPS6KA4O75676 772 aa18.58■□□□□ 0.56
ABCC3-212ENST00000513511 ADRA2BP18089 450 aa18.58■□□□□ 0.56
ABCC3-212ENST00000513511 U2AF1L5P0DN76 240 aaPredicted RBP18.57■□□□□ 0.56
ABCC3-212ENST00000513511 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.561e-7■□□□□ 10.7
ABCC3-212ENST00000513511 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
ABCC3-212ENST00000513511 NLGN1Q8N2Q7 840 aa18.57■□□□□ 0.56
ABCC3-212ENST00000513511 GYS1P13807 737 aa18.56■□□□□ 0.56
ABCC3-212ENST00000513511 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
ABCC3-212ENST00000513511 MRC1P22897 1456 aa18.55■□□□□ 0.56
ABCC3-212ENST00000513511 PRKAR2BP31323 418 aa18.55■□□□□ 0.56
ABCC3-212ENST00000513511 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
ABCC3-212ENST00000513511 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
ABCC3-212ENST00000513511 PARP3Q9Y6F1 533 aa18.54■□□□□ 0.56
ABCC3-212ENST00000513511 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
ABCC3-212ENST00000513511 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
ABCC3-212ENST00000513511 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
ABCC3-212ENST00000513511 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
ABCC3-212ENST00000513511 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
ABCC3-212ENST00000513511 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
ABCC3-212ENST00000513511 KCPQ6ZWJ8 1503 aa18.51■□□□□ 0.55
ABCC3-212ENST00000513511 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
ABCC3-212ENST00000513511 INTS5Q6P9B9 1019 aaKnown RBP18.51■□□□□ 0.55
ABCC3-212ENST00000513511 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
ABCC3-212ENST00000513511 C1QTNF8P60827 252 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 FKBP8Q14318 412 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 TTC5Q8N0Z6 440 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
ABCC3-212ENST00000513511 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 BCS1LQ9Y276 419 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 KIF13BQ9NQT8 1826 aa18.5■□□□□ 0.55
ABCC3-212ENST00000513511 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 ZPR1O75312 459 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 FCHSD2O94868 740 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 TEFQ10587 303 aa18.49■□□□□ 0.55
ABCC3-212ENST00000513511 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms