RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 CHD4Q14839 1912 aa17.08■□□□□ 0.33
UBE2D3-231ENST00000513098 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
UBE2D3-231ENST00000513098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-231ENST00000513098 MTHFSP49914 203 aa17.08■□□□□ 0.32
UBE2D3-231ENST00000513098 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
UBE2D3-231ENST00000513098 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
UBE2D3-231ENST00000513098 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
UBE2D3-231ENST00000513098 GPR162Q16538 588 aa17.07■□□□□ 0.32
UBE2D3-231ENST00000513098 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
UBE2D3-231ENST00000513098 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-231ENST00000513098 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-231ENST00000513098 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
UBE2D3-231ENST00000513098 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
UBE2D3-231ENST00000513098 CABP4P57796 275 aa17.05■□□□□ 0.32
UBE2D3-231ENST00000513098 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
UBE2D3-231ENST00000513098 MSL1Q68DK7 614 aa17.05■□□□□ 0.32
UBE2D3-231ENST00000513098 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
UBE2D3-231ENST00000513098 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
UBE2D3-231ENST00000513098 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
UBE2D3-231ENST00000513098 GNPATO15228 680 aa17.02■□□□□ 0.32
UBE2D3-231ENST00000513098 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
UBE2D3-231ENST00000513098 ADRA2BP18089 450 aa17.02■□□□□ 0.32
UBE2D3-231ENST00000513098 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
UBE2D3-231ENST00000513098 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 PHF14O94880 888 aa17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 SMIM5Q71RC9 77 aa17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-231ENST00000513098 RPS6KA4O75676 772 aa17■□□□□ 0.31
UBE2D3-231ENST00000513098 YBX3P16989 372 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBE2D3-231ENST00000513098 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
UBE2D3-231ENST00000513098 ARHGEF1Q92888 912 aaKnown RBP16.98■□□□□ 0.31
UBE2D3-231ENST00000513098 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
UBE2D3-231ENST00000513098 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
UBE2D3-231ENST00000513098 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
UBE2D3-231ENST00000513098 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-231ENST00000513098 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-231ENST00000513098 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-231ENST00000513098 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-231ENST00000513098 HMOX1P09601 288 aa16.96■□□□□ 0.31
UBE2D3-231ENST00000513098 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
UBE2D3-231ENST00000513098 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-231ENST00000513098 MMP10P09238 476 aa16.94■□□□□ 0.3
UBE2D3-231ENST00000513098 GYS1P13807 737 aa16.94■□□□□ 0.3
UBE2D3-231ENST00000513098 RFC4P35249 363 aa16.94■□□□□ 0.3
UBE2D3-231ENST00000513098 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-231ENST00000513098 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-231ENST00000513098 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-231ENST00000513098 MRC1P22897 1456 aa16.93■□□□□ 0.3
UBE2D3-231ENST00000513098 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
UBE2D3-231ENST00000513098 TGFB2P61812 414 aa16.92■□□□□ 0.3
UBE2D3-231ENST00000513098 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-231ENST00000513098 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
UBE2D3-231ENST00000513098 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
UBE2D3-231ENST00000513098 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
UBE2D3-231ENST00000513098 CYP19A1P11511 503 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 IL17REQ8NFR9 667 aa16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-231ENST00000513098 TJP1Q07157 1748 aa16.87■□□□□ 0.29
UBE2D3-231ENST00000513098 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
UBE2D3-231ENST00000513098 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-231ENST00000513098 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
UBE2D3-231ENST00000513098 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
UBE2D3-231ENST00000513098 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-231ENST00000513098 TM4SF1P30408 202 aa16.86■□□□□ 0.29
UBE2D3-231ENST00000513098 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
UBE2D3-231ENST00000513098 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
UBE2D3-231ENST00000513098 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
UBE2D3-231ENST00000513098 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 PPP2R1AP30153 589 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 FKBP8Q14318 412 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
UBE2D3-231ENST00000513098 FCHSD2O94868 740 aa16.84■□□□□ 0.29
UBE2D3-231ENST00000513098 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
UBE2D3-231ENST00000513098 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
UBE2D3-231ENST00000513098 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
UBE2D3-231ENST00000513098 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
UBE2D3-231ENST00000513098 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 ADCY9O60503 1353 aa16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 ZPR1O75312 459 aa16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 TEX13AQ9BXU3 409 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-231ENST00000513098 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 STARD3NLO95772 234 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 KCNA3P22001 575 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 DDR1Q08345 913 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 TEFQ10587 303 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
UBE2D3-231ENST00000513098 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms