RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
VEGFA-216ENST00000512683 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
VEGFA-216ENST00000512683 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
VEGFA-216ENST00000512683 TGFB2P61812 414 aa17.19■□□□□ 0.34
VEGFA-216ENST00000512683 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
VEGFA-216ENST00000512683 CHD4Q14839 1912 aa17.18■□□□□ 0.34
VEGFA-216ENST00000512683 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
VEGFA-216ENST00000512683 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
VEGFA-216ENST00000512683 MTHFSP49914 203 aa17.17■□□□□ 0.34
VEGFA-216ENST00000512683 CABP4P57796 275 aa17.17■□□□□ 0.34
VEGFA-216ENST00000512683 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
VEGFA-216ENST00000512683 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
VEGFA-216ENST00000512683 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-216ENST00000512683 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-216ENST00000512683 CNTNAP4Q9C0A0 1308 aa17.16■□□□□ 0.34
VEGFA-216ENST00000512683 MMP10P09238 476 aa17.15■□□□□ 0.34
VEGFA-216ENST00000512683 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
VEGFA-216ENST00000512683 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
VEGFA-216ENST00000512683 C5P01031 1676 aa17.14■□□□□ 0.33
VEGFA-216ENST00000512683 RFC4P35249 363 aa17.14■□□□□ 0.33
VEGFA-216ENST00000512683 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
VEGFA-216ENST00000512683 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
VEGFA-216ENST00000512683 KDRP35968 1356 aa17.14■□□□□ 0.33
VEGFA-216ENST00000512683 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
VEGFA-216ENST00000512683 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
VEGFA-216ENST00000512683 GOLGB1Q14789 3259 aaKnown RBP17.13■□□□□ 0.33
VEGFA-216ENST00000512683 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
VEGFA-216ENST00000512683 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
VEGFA-216ENST00000512683 IL13P35225 146 aa17.12■□□□□ 0.33
VEGFA-216ENST00000512683 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
VEGFA-216ENST00000512683 GYS1P13807 737 aa17.11■□□□□ 0.33
VEGFA-216ENST00000512683 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
VEGFA-216ENST00000512683 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
VEGFA-216ENST00000512683 ADCY9O60503 1353 aa17.11■□□□□ 0.33
VEGFA-216ENST00000512683 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
VEGFA-216ENST00000512683 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-216ENST00000512683 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
VEGFA-216ENST00000512683 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
VEGFA-216ENST00000512683 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
VEGFA-216ENST00000512683 ITGB4P16144 1822 aa17.07■□□□□ 0.32
VEGFA-216ENST00000512683 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
VEGFA-216ENST00000512683 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-216ENST00000512683 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
VEGFA-216ENST00000512683 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
VEGFA-216ENST00000512683 HSPA6P17066 643 aa17.05■□□□□ 0.32
VEGFA-216ENST00000512683 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
VEGFA-216ENST00000512683 BCS1LQ9Y276 419 aa17.05■□□□□ 0.32
VEGFA-216ENST00000512683 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
VEGFA-216ENST00000512683 UBR3Q6ZT12 1888 aa17.04■□□□□ 0.32
VEGFA-216ENST00000512683 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
VEGFA-216ENST00000512683 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
VEGFA-216ENST00000512683 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
VEGFA-216ENST00000512683 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
VEGFA-216ENST00000512683 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-216ENST00000512683 DPEP1P16444 411 aa17.03■□□□□ 0.32
VEGFA-216ENST00000512683 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
VEGFA-216ENST00000512683 PXDNLA1KZ92 1463 aa17.03■□□□□ 0.32
VEGFA-216ENST00000512683 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
VEGFA-216ENST00000512683 ZPR1O75312 459 aa17.02■□□□□ 0.32
VEGFA-216ENST00000512683 FCHSD2O94868 740 aa17.02■□□□□ 0.32
VEGFA-216ENST00000512683 TM4SF1P30408 202 aa17.02■□□□□ 0.32
VEGFA-216ENST00000512683 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
VEGFA-216ENST00000512683 KIF3CO14782 793 aa17.01■□□□□ 0.31
VEGFA-216ENST00000512683 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
VEGFA-216ENST00000512683 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
VEGFA-216ENST00000512683 KCNA3P22001 575 aa17.01■□□□□ 0.31
VEGFA-216ENST00000512683 FKBP8Q14318 412 aa17■□□□□ 0.31
VEGFA-216ENST00000512683 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
VEGFA-216ENST00000512683 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
VEGFA-216ENST00000512683 LGR6Q9HBX8 967 aa17■□□□□ 0.31
VEGFA-216ENST00000512683 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
VEGFA-216ENST00000512683 TOMM70O94826 608 aa16.99■□□□□ 0.31
VEGFA-216ENST00000512683 CYP19A1P11511 503 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-216ENST00000512683 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
VEGFA-216ENST00000512683 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
VEGFA-216ENST00000512683 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-216ENST00000512683 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
VEGFA-216ENST00000512683 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
VEGFA-216ENST00000512683 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-216ENST00000512683 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
VEGFA-216ENST00000512683 STARD3NLO95772 234 aa16.97■□□□□ 0.31
VEGFA-216ENST00000512683 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
VEGFA-216ENST00000512683 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-216ENST00000512683 A0A087WZG4 1122 aa16.96■□□□□ 0.31
VEGFA-216ENST00000512683 APLP1P51693 650 aa16.96■□□□□ 0.31
VEGFA-216ENST00000512683 DDR1Q08345 913 aa16.96■□□□□ 0.31
VEGFA-216ENST00000512683 HMOX1P09601 288 aa16.95■□□□□ 0.3
VEGFA-216ENST00000512683 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
VEGFA-216ENST00000512683 GAS2L2Q8NHY3 880 aa16.95■□□□□ 0.3
VEGFA-216ENST00000512683 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
VEGFA-216ENST00000512683 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
VEGFA-216ENST00000512683 C9orf131Q5VYM1 1079 aa16.94■□□□□ 0.3
VEGFA-216ENST00000512683 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
VEGFA-216ENST00000512683 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
VEGFA-216ENST00000512683 KDM2BQ8NHM5 1336 aa16.93■□□□□ 0.3
VEGFA-216ENST00000512683 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
VEGFA-216ENST00000512683 NFIXQ14938 502 aa16.92■□□□□ 0.3
VEGFA-216ENST00000512683 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
VEGFA-216ENST00000512683 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
VEGFA-216ENST00000512683 C4AP0C0L4 1744 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms