RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 S1PR4O95977 384 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 POGKQ9P215 609 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
SNF8-211ENST00000512243 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
SNF8-211ENST00000512243 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
SNF8-211ENST00000512243 ADH1BP00325 375 aa13.25□□□□□ -0.29
SNF8-211ENST00000512243 CD46P15529 392 aa13.25□□□□□ -0.29
SNF8-211ENST00000512243 MORN1Q5T089 497 aa13.25□□□□□ -0.29
SNF8-211ENST00000512243 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
SNF8-211ENST00000512243 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
SNF8-211ENST00000512243 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
SNF8-211ENST00000512243 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
SNF8-211ENST00000512243 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
SNF8-211ENST00000512243 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
SNF8-211ENST00000512243 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNF8-211ENST00000512243 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 MSH6P52701 1360 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
SNF8-211ENST00000512243 TMUB1Q9BVT8 246 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 GPCPD1Q9NPB8 672 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 DCCP43146 1447 aa13.22□□□□□ -0.29
SNF8-211ENST00000512243 CLCN1P35523 988 aa13.21□□□□□ -0.29
SNF8-211ENST00000512243 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNF8-211ENST00000512243 SPSB2Q99619 263 aa13.21□□□□□ -0.29
SNF8-211ENST00000512243 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
SNF8-211ENST00000512243 ITSN1Q15811 1721 aa13.2□□□□□ -0.3
SNF8-211ENST00000512243 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
SNF8-211ENST00000512243 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
SNF8-211ENST00000512243 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
SNF8-211ENST00000512243 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
SNF8-211ENST00000512243 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
SNF8-211ENST00000512243 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
SNF8-211ENST00000512243 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
SNF8-211ENST00000512243 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
SNF8-211ENST00000512243 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
SNF8-211ENST00000512243 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
SNF8-211ENST00000512243 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
SNF8-211ENST00000512243 KDM4AO75164 1064 aa13.16□□□□□ -0.3
SNF8-211ENST00000512243 ATF3P18847 181 aa13.16□□□□□ -0.3
SNF8-211ENST00000512243 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
SNF8-211ENST00000512243 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
SNF8-211ENST00000512243 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 RNF19BQ6ZMZ0 732 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 HLA-CQ95604 372 aa13.15□□□□□ -0.3
SNF8-211ENST00000512243 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
SNF8-211ENST00000512243 ANKLE1Q8NAG6 615 aa13.14□□□□□ -0.31
SNF8-211ENST00000512243 EMID1Q96A84 441 aaPredicted RBP13.14□□□□□ -0.31
SNF8-211ENST00000512243 TESK2Q96S53 571 aa13.14□□□□□ -0.31
SNF8-211ENST00000512243 KIF1AQ12756 1690 aa13.14□□□□□ -0.31
SNF8-211ENST00000512243 MST1RQ04912 1400 aa13.13□□□□□ -0.31
SNF8-211ENST00000512243 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
SNF8-211ENST00000512243 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
SNF8-211ENST00000512243 TMF1P82094 1093 aa13.13□□□□□ -0.31
SNF8-211ENST00000512243 ATP7BP35670 1465 aa13.12□□□□□ -0.31
SNF8-211ENST00000512243 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
SNF8-211ENST00000512243 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
SNF8-211ENST00000512243 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
SNF8-211ENST00000512243 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 TOM1O60784 492 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 SLC19A1P41440 591 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
SNF8-211ENST00000512243 CDK19Q9BWU1 502 aa13.11□□□□□ -0.31
SNF8-211ENST00000512243 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
SNF8-211ENST00000512243 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
SNF8-211ENST00000512243 AMHR2Q16671 573 aa13.1□□□□□ -0.31
SNF8-211ENST00000512243 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
SNF8-211ENST00000512243 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
SNF8-211ENST00000512243 MYOM1P52179 1685 aa13.09□□□□□ -0.31
SNF8-211ENST00000512243 HOXA2O43364 376 aa13.09□□□□□ -0.31
SNF8-211ENST00000512243 GFRA3O60609 400 aa13.09□□□□□ -0.31
SNF8-211ENST00000512243 SSTR3P32745 418 aaPredicted RBP13.09□□□□□ -0.31
SNF8-211ENST00000512243 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
SNF8-211ENST00000512243 AKAP12Q02952 1782 aa13.08□□□□□ -0.32
SNF8-211ENST00000512243 USP46P62068 366 aa13.08□□□□□ -0.32
SNF8-211ENST00000512243 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
SNF8-211ENST00000512243 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.32
SNF8-211ENST00000512243 NHSL1Q5SYE7 1610 aa13.08□□□□□ -0.32
SNF8-211ENST00000512243 PRR36Q9H6K5 1346 aa13.08□□□□□ -0.32
SNF8-211ENST00000512243 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
SNF8-211ENST00000512243 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
SNF8-211ENST00000512243 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
SNF8-211ENST00000512243 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
SNF8-211ENST00000512243 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
SNF8-211ENST00000512243 TRIM66O15016 1216 aa13.06□□□□□ -0.32
SNF8-211ENST00000512243 Q6ZNB5 142 aa13.06□□□□□ -0.32
SNF8-211ENST00000512243 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
SNF8-211ENST00000512243 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
SNF8-211ENST00000512243 FCF1Q9Y324 198 aaKnown RBP13.06□□□□□ -0.32
SNF8-211ENST00000512243 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms