RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 CRTC2Q53ET0 693 aaPredicted RBP11.02□□□□□ -0.65
LINC01088-208ENST00000511895 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
LINC01088-208ENST00000511895 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
LINC01088-208ENST00000511895 ZNF787Q6DD87 383 aa11.01□□□□□ -0.65
LINC01088-208ENST00000511895 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC01088-208ENST00000511895 XAGE2Q96GT9 111 aa11.01□□□□□ -0.65
LINC01088-208ENST00000511895 FAM196BA6NMK8 535 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 SOBPA7XYQ1 873 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 BACH1O14867 736 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 GTF2E1P29083 439 aaPredicted RBP11□□□□□ -0.65
LINC01088-208ENST00000511895 CENPCQ03188 943 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 TLR1Q15399 786 aa11□□□□□ -0.65
LINC01088-208ENST00000511895 FOXD4L5Q5VV16 416 aaPredicted RBP11□□□□□ -0.65
LINC01088-208ENST00000511895 RNF144AP50876 292 aaPredicted RBP10.99□□□□□ -0.65
LINC01088-208ENST00000511895 PTK7Q13308 1070 aa10.99□□□□□ -0.65
LINC01088-208ENST00000511895 SIX5Q8N196 739 aa10.99□□□□□ -0.65
LINC01088-208ENST00000511895 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
LINC01088-208ENST00000511895 ZNF358Q9NW07 568 aa10.99□□□□□ -0.65
LINC01088-208ENST00000511895 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
LINC01088-208ENST00000511895 SFI1A8K8P3 1242 aa10.98□□□□□ -0.65
LINC01088-208ENST00000511895 GPC1P35052 558 aa10.98□□□□□ -0.65
LINC01088-208ENST00000511895 DPYDQ12882 1025 aa10.98□□□□□ -0.65
LINC01088-208ENST00000511895 PRICKLE2Q7Z3G6 844 aa10.98□□□□□ -0.65
LINC01088-208ENST00000511895 ANKMY2Q8IV38 441 aa10.98□□□□□ -0.65
LINC01088-208ENST00000511895 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
LINC01088-208ENST00000511895 SEC13P55735 322 aa10.97□□□□□ -0.65
LINC01088-208ENST00000511895 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.97□□□□□ -0.65
LINC01088-208ENST00000511895 TMEM214Q6NUQ4 689 aaKnown RBP10.97□□□□□ -0.65
LINC01088-208ENST00000511895 LYSMD3Q7Z3D4 306 aa10.97□□□□□ -0.65
LINC01088-208ENST00000511895 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
LINC01088-208ENST00000511895 NOVA2Q9UNW9 492 aaKnown RBP10.97□□□□□ -0.65
LINC01088-208ENST00000511895 SMTNP53814 917 aa10.96□□□□□ -0.65
LINC01088-208ENST00000511895 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.65
LINC01088-208ENST00000511895 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
LINC01088-208ENST00000511895 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
LINC01088-208ENST00000511895 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
LINC01088-208ENST00000511895 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
LINC01088-208ENST00000511895 HRH3Q9Y5N1 445 aa10.95□□□□□ -0.66
LINC01088-208ENST00000511895 RHOQP17081 205 aa10.94□□□□□ -0.66
LINC01088-208ENST00000511895 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
LINC01088-208ENST00000511895 A6NJY4 79 aa10.93□□□□□ -0.66
LINC01088-208ENST00000511895 ATG7O95352 703 aa10.93□□□□□ -0.66
LINC01088-208ENST00000511895 GNASQ5JWF2 1037 aa10.93□□□□□ -0.66
LINC01088-208ENST00000511895 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
LINC01088-208ENST00000511895 TSEN2Q8NCE0 465 aaKnown RBP10.93□□□□□ -0.66
LINC01088-208ENST00000511895 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
LINC01088-208ENST00000511895 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
LINC01088-208ENST00000511895 DKK1O94907 266 aa10.92□□□□□ -0.66
LINC01088-208ENST00000511895 POU4F2Q12837 409 aa10.92□□□□□ -0.66
LINC01088-208ENST00000511895 ARXQ96QS3 562 aa10.91□□□□□ -0.66
LINC01088-208ENST00000511895 M0R2N6 131 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 PHKA2P46019 1235 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 NBPF10Q6P3W6 841 aaKnown RBP10.9□□□□□ -0.66
LINC01088-208ENST00000511895 TAS1R3Q7RTX0 852 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
LINC01088-208ENST00000511895 NBPF15Q8N660 670 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 STK32AQ8WU08 396 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 ZMIZ1Q9ULJ6 1067 aa10.9□□□□□ -0.66
LINC01088-208ENST00000511895 CDK2AP1O14519 115 aa10.89□□□□□ -0.67
LINC01088-208ENST00000511895 LGR5O75473 907 aa10.89□□□□□ -0.67
LINC01088-208ENST00000511895 ELOAQ14241 798 aaKnown RBP10.89□□□□□ -0.67
LINC01088-208ENST00000511895 MTFR1Q15390 333 aa10.89□□□□□ -0.67
LINC01088-208ENST00000511895 TBCELQ5QJ74 424 aa10.89□□□□□ -0.67
LINC01088-208ENST00000511895 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
LINC01088-208ENST00000511895 PTSQ03393 145 aa10.88□□□□□ -0.67
LINC01088-208ENST00000511895 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
LINC01088-208ENST00000511895 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
LINC01088-208ENST00000511895 SCHIP1Q9P0W5 487 aaPredicted RBP10.88□□□□□ -0.67
LINC01088-208ENST00000511895 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 CSB-PGBD3P0DP91 1061 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 C4orf17Q53FE4 359 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 TSPAN10Q9H1Z9 355 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-208ENST00000511895 TIMMDC1Q9NPL8 285 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 USP3Q9Y6I4 520 aa10.87□□□□□ -0.67
LINC01088-208ENST00000511895 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
LINC01088-208ENST00000511895 EPHA4P54764 986 aa10.86□□□□□ -0.67
LINC01088-208ENST00000511895 TMEM164Q5U3C3 297 aa10.86□□□□□ -0.67
LINC01088-208ENST00000511895 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-208ENST00000511895 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
LINC01088-208ENST00000511895 FOXK2Q01167 660 aa10.84□□□□□ -0.67
LINC01088-208ENST00000511895 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
LINC01088-208ENST00000511895 SCG3Q8WXD2 468 aaKnown RBP10.84□□□□□ -0.67
LINC01088-208ENST00000511895 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
LINC01088-208ENST00000511895 PPP1R12BO60237 982 aaPredicted RBP10.83□□□□□ -0.68
LINC01088-208ENST00000511895 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
LINC01088-208ENST00000511895 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
LINC01088-208ENST00000511895 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
LINC01088-208ENST00000511895 ZNF232Q9UNY5 417 aa10.83□□□□□ -0.68
LINC01088-208ENST00000511895 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.68
LINC01088-208ENST00000511895 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
LINC01088-208ENST00000511895 SWI5Q1ZZU3 235 aa10.82□□□□□ -0.68
LINC01088-208ENST00000511895 SLC35F4A4IF30 521 aa10.81□□□□□ -0.68
LINC01088-208ENST00000511895 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
LINC01088-208ENST00000511895 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
LINC01088-208ENST00000511895 NXF1Q9UBU9 619 aaKnown RBP10.81□□□□□ -0.68
LINC01088-208ENST00000511895 DYRK1BQ9Y463 629 aa10.81□□□□□ -0.68
LINC01088-208ENST00000511895 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 A0A1B0GTH6 734 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms