RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 MSL1Q68DK7 614 aa17.17■□□□□ 0.34
KDM3B-206ENST00000509468 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
KDM3B-206ENST00000509468 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
KDM3B-206ENST00000509468 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
KDM3B-206ENST00000509468 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
KDM3B-206ENST00000509468 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
KDM3B-206ENST00000509468 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
KDM3B-206ENST00000509468 PHF14O94880 888 aa17.15■□□□□ 0.34
KDM3B-206ENST00000509468 ITPK1Q13572 414 aa17.15■□□□□ 0.34
KDM3B-206ENST00000509468 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
KDM3B-206ENST00000509468 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
KDM3B-206ENST00000509468 GNPATO15228 680 aa17.14■□□□□ 0.33
KDM3B-206ENST00000509468 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
KDM3B-206ENST00000509468 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
KDM3B-206ENST00000509468 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
KDM3B-206ENST00000509468 ZNF784Q8NCA9 323 aaPredicted RBP17.13■□□□□ 0.33
KDM3B-206ENST00000509468 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
KDM3B-206ENST00000509468 KDRP35968 1356 aa17.13■□□□□ 0.33
KDM3B-206ENST00000509468 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
KDM3B-206ENST00000509468 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
KDM3B-206ENST00000509468 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
KDM3B-206ENST00000509468 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
KDM3B-206ENST00000509468 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
KDM3B-206ENST00000509468 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
KDM3B-206ENST00000509468 SMIM5Q71RC9 77 aa17.1■□□□□ 0.33
KDM3B-206ENST00000509468 UTRNP46939 3433 aa17.09■□□□□ 0.33
KDM3B-206ENST00000509468 ADRA2BP18089 450 aa17.09■□□□□ 0.33
KDM3B-206ENST00000509468 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
KDM3B-206ENST00000509468 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
KDM3B-206ENST00000509468 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
KDM3B-206ENST00000509468 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
KDM3B-206ENST00000509468 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
KDM3B-206ENST00000509468 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
KDM3B-206ENST00000509468 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
KDM3B-206ENST00000509468 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
KDM3B-206ENST00000509468 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
KDM3B-206ENST00000509468 RFC4P35249 363 aa17.07■□□□□ 0.32
KDM3B-206ENST00000509468 HMOX1P09601 288 aa17.06■□□□□ 0.32
KDM3B-206ENST00000509468 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
KDM3B-206ENST00000509468 COL5A3P25940 1745 aaPredicted RBP17.05■□□□□ 0.32
KDM3B-206ENST00000509468 MMP10P09238 476 aa17.04■□□□□ 0.32
KDM3B-206ENST00000509468 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
KDM3B-206ENST00000509468 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
KDM3B-206ENST00000509468 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
KDM3B-206ENST00000509468 TGFB2P61812 414 aa17.02■□□□□ 0.32
KDM3B-206ENST00000509468 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.32
KDM3B-206ENST00000509468 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
KDM3B-206ENST00000509468 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
KDM3B-206ENST00000509468 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
KDM3B-206ENST00000509468 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
KDM3B-206ENST00000509468 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
KDM3B-206ENST00000509468 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
KDM3B-206ENST00000509468 GYS1P13807 737 aa17■□□□□ 0.31
KDM3B-206ENST00000509468 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
KDM3B-206ENST00000509468 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
KDM3B-206ENST00000509468 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
KDM3B-206ENST00000509468 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
KDM3B-206ENST00000509468 CICQ96RK0 1608 aaPredicted RBP16.97■□□□□ 0.31
KDM3B-206ENST00000509468 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
KDM3B-206ENST00000509468 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.31
KDM3B-206ENST00000509468 ZPR1O75312 459 aa16.96■□□□□ 0.31
KDM3B-206ENST00000509468 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
KDM3B-206ENST00000509468 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
KDM3B-206ENST00000509468 TJP1Q07157 1748 aa16.96■□□□□ 0.3
KDM3B-206ENST00000509468 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
KDM3B-206ENST00000509468 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
KDM3B-206ENST00000509468 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
KDM3B-206ENST00000509468 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
KDM3B-206ENST00000509468 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
KDM3B-206ENST00000509468 MRC1P22897 1456 aa16.94■□□□□ 0.3
KDM3B-206ENST00000509468 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
KDM3B-206ENST00000509468 TEFQ10587 303 aa16.94■□□□□ 0.3
KDM3B-206ENST00000509468 WWC3Q9ULE0 1092 aa16.94■□□□□ 0.3
KDM3B-206ENST00000509468 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
KDM3B-206ENST00000509468 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
KDM3B-206ENST00000509468 STARD3NLO95772 234 aa16.93■□□□□ 0.3
KDM3B-206ENST00000509468 FKBP8Q14318 412 aa16.93■□□□□ 0.3
KDM3B-206ENST00000509468 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
KDM3B-206ENST00000509468 SRP68Q9UHB9 627 aaKnown RBP16.93■□□□□ 0.3
KDM3B-206ENST00000509468 TM4SF1P30408 202 aa16.92■□□□□ 0.3
KDM3B-206ENST00000509468 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
KDM3B-206ENST00000509468 BCS1LQ9Y276 419 aa16.92■□□□□ 0.3
KDM3B-206ENST00000509468 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
KDM3B-206ENST00000509468 C10orf71Q711Q0 1435 aa16.91■□□□□ 0.3
KDM3B-206ENST00000509468 DPEP1P16444 411 aa16.91■□□□□ 0.3
KDM3B-206ENST00000509468 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
KDM3B-206ENST00000509468 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
KDM3B-206ENST00000509468 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
KDM3B-206ENST00000509468 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
KDM3B-206ENST00000509468 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
KDM3B-206ENST00000509468 GPBP1L1Q9HC44 474 aaPredicted RBP16.9■□□□□ 0.3
KDM3B-206ENST00000509468 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
KDM3B-206ENST00000509468 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
KDM3B-206ENST00000509468 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 A0A087WZG4 1122 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms