RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
UBE2D3-223ENST00000508249 MMP10P09238 476 aa12.91□□□□□ -0.34
UBE2D3-223ENST00000508249 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-223ENST00000508249 KCNA3P22001 575 aa12.9□□□□□ -0.34
UBE2D3-223ENST00000508249 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
UBE2D3-223ENST00000508249 INSRP06213 1382 aa12.9□□□□□ -0.34
UBE2D3-223ENST00000508249 TJP1Q07157 1748 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 AMPHP49418 695 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 SIK1P57059 783 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 COG3Q96JB2 828 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
UBE2D3-223ENST00000508249 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 DPEP1P16444 411 aa12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 TGFB2P61812 414 aa12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 FSTL1Q12841 308 aa12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 CCDC88AQ3V6T2 1871 aa12.88□□□□□ -0.35
UBE2D3-223ENST00000508249 GNPATO15228 680 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 TESK2Q96S53 571 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 AFDNP55196 1824 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 NRXN2Q9P2S2 1712 aa12.87□□□□□ -0.35
UBE2D3-223ENST00000508249 FLT4P35916 1363 aa12.86□□□□□ -0.35
UBE2D3-223ENST00000508249 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
UBE2D3-223ENST00000508249 ARHGAP27Q6ZUM4 889 aa12.85□□□□□ -0.35
UBE2D3-223ENST00000508249 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
UBE2D3-223ENST00000508249 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 FYB1O15117 783 aa12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 SLC34A2O95436 690 aa12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 GYS1P13807 737 aa12.84□□□□□ -0.35
UBE2D3-223ENST00000508249 FCHSD2O94868 740 aa12.83□□□□□ -0.36
UBE2D3-223ENST00000508249 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-223ENST00000508249 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
UBE2D3-223ENST00000508249 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-223ENST00000508249 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
UBE2D3-223ENST00000508249 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
UBE2D3-223ENST00000508249 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
UBE2D3-223ENST00000508249 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-223ENST00000508249 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
UBE2D3-223ENST00000508249 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-223ENST00000508249 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
UBE2D3-223ENST00000508249 DDR1Q08345 913 aa12.8□□□□□ -0.36
UBE2D3-223ENST00000508249 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
UBE2D3-223ENST00000508249 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
UBE2D3-223ENST00000508249 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
UBE2D3-223ENST00000508249 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 TMF1P82094 1093 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 SMC1BQ8NDV3 1235 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
UBE2D3-223ENST00000508249 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
UBE2D3-223ENST00000508249 PHKG2P15735 406 aa12.78□□□□□ -0.36
UBE2D3-223ENST00000508249 RASSF7Q02833 373 aa12.78□□□□□ -0.36
UBE2D3-223ENST00000508249 POTECB2RU33 542 aa12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 ADRA2BP18089 450 aa12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 CHRNA5P30532 468 aa12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-223ENST00000508249 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-223ENST00000508249 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 FKBP8Q14318 412 aa12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 EYA1Q99502 592 aa12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 USP42Q9H9J4 1324 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-223ENST00000508249 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
UBE2D3-223ENST00000508249 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
UBE2D3-223ENST00000508249 CACNA1SQ13698 1873 aa12.74□□□□□ -0.37
UBE2D3-223ENST00000508249 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-223ENST00000508249 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
UBE2D3-223ENST00000508249 ARFGEF2Q9Y6D5 1785 aa12.73□□□□□ -0.37
UBE2D3-223ENST00000508249 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 WASHC2AQ641Q2 1341 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 NFKBIEO00221 500 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
UBE2D3-223ENST00000508249 THSD7BQ9C0I4 1608 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms