RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 UACAQ9BZF9 1416 aa12.83□□□□□ -0.35
PDLIM5-210ENST00000508216 ARAP1Q96P48 1450 aa12.83□□□□□ -0.35
PDLIM5-210ENST00000508216 CHMLP26374 656 aa12.83□□□□□ -0.36
PDLIM5-210ENST00000508216 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
PDLIM5-210ENST00000508216 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-210ENST00000508216 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
PDLIM5-210ENST00000508216 PCDHGA4Q9Y5G9 962 aa12.83□□□□□ -0.36
PDLIM5-210ENST00000508216 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 KMT5BQ4FZB7 885 aa12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 SLX1AQ9BQ83 275 aa12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-210ENST00000508216 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 CAND2O75155 1236 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 CORO7P57737 925 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 PDIA5Q14554 519 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 TEX11Q8IYF3 940 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 KDRP35968 1356 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 IMPDH2P12268 514 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 MAF1Q9H063 256 aa12.81□□□□□ -0.36
PDLIM5-210ENST00000508216 KIF2AO00139 706 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 BAG4O95429 457 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 CRYMQ14894 314 aa12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 RBM12BQ8IXT5 1001 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 EXOC4Q96A65 974 aa12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 CHCHD3Q9NX63 227 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 SUN2Q9UH99 717 aa12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
PDLIM5-210ENST00000508216 SKILP12757 684 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 TRIM74Q86UV6 250 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 TRIM73Q86UV7 250 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 IRAK4Q9NWZ3 460 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 MYBL2P10244 700 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 PRPHP41219 470 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 RPS6KA3P51812 740 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 ZRSR1Q15695 479 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 E2F4Q16254 413 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 GNL3LQ9NVN8 582 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
PDLIM5-210ENST00000508216 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 H2AFXP16104 143 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 TBC1D8BQ0IIM8 1120 aa12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 RBBP5Q15291 538 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 AK7Q96M32 723 aa12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-210ENST00000508216 KDM4AO75164 1064 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 GCFC2P16383 781 aaKnown RBP12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 NAIF1Q69YI7 327 aaPredicted RBP12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 AGAP3Q96P47 875 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 LZTS2Q9BRK4 669 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 USP25Q9UHP3 1055 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.36
PDLIM5-210ENST00000508216 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-210ENST00000508216 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
PDLIM5-210ENST00000508216 MBD3O95983 291 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ACTN2P35609 894 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 NEDD9Q14511 834 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 NCAPG2Q86XI2 1143 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ZNF483Q8TF39 744 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 SPATS2LQ9NUQ6 558 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 KIF7Q2M1P5 1343 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 PTPRGP23470 1445 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 EIF3CLB5ME19 914 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 MRPL12P52815 198 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
PDLIM5-210ENST00000508216 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms