RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 LGR6Q9HBX8 967 aa22.14■■□□□ 1.14
SFXN1-208ENST00000507823 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
SFXN1-208ENST00000507823 FLIIQ13045 1269 aa22.14■■□□□ 1.13
SFXN1-208ENST00000507823 CEP85Q6P2H3 762 aa22.14■■□□□ 1.13
SFXN1-208ENST00000507823 TBC1D32Q96NH3 1257 aa22.14■■□□□ 1.13
SFXN1-208ENST00000507823 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
SFXN1-208ENST00000507823 BMP2KLQ5H9B9 411 aa22.13■■□□□ 1.13
SFXN1-208ENST00000507823 ANKRD45Q5TZF3 282 aa22.12■■□□□ 1.13
SFXN1-208ENST00000507823 MEIS3Q99687 375 aa22.12■■□□□ 1.13
SFXN1-208ENST00000507823 CHMP4AQ9BY43 222 aa22.12■■□□□ 1.13
SFXN1-208ENST00000507823 SPATA31A3Q5VYP0 1347 aa22.12■■□□□ 1.13
SFXN1-208ENST00000507823 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
SFXN1-208ENST00000507823 CPDO75976 1380 aa22.11■■□□□ 1.13
SFXN1-208ENST00000507823 HEG1Q9ULI3 1381 aa22.11■■□□□ 1.13
SFXN1-208ENST00000507823 UPF2Q9HAU5 1272 aaKnown RBP22.1■■□□□ 1.13
SFXN1-208ENST00000507823 KDM4FA0A1W2PPD8 638 aa22.1■■□□□ 1.13
SFXN1-208ENST00000507823 F6X3S4 739 aa22.09■■□□□ 1.13
SFXN1-208ENST00000507823 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
SFXN1-208ENST00000507823 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
SFXN1-208ENST00000507823 ZC3H6P61129 1189 aaKnown RBP22.08■■□□□ 1.12
SFXN1-208ENST00000507823 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.12
SFXN1-208ENST00000507823 TEFQ10587 303 aa22.07■■□□□ 1.12
SFXN1-208ENST00000507823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
SFXN1-208ENST00000507823 SCN11AQ9UI33 1791 aa22.06■■□□□ 1.12
SFXN1-208ENST00000507823 MPRIPQ6WCQ1 1025 aa22.06■■□□□ 1.12
SFXN1-208ENST00000507823 FKBP5Q13451 457 aaPredicted RBP22.06■■□□□ 1.12
SFXN1-208ENST00000507823 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
SFXN1-208ENST00000507823 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
SFXN1-208ENST00000507823 PKD1L3Q7Z443 1732 aa22.05■■□□□ 1.12
SFXN1-208ENST00000507823 GNAI3P08754 354 aa22.04■■□□□ 1.12
SFXN1-208ENST00000507823 SLC4A10Q6U841 1118 aa22.04■■□□□ 1.12
SFXN1-208ENST00000507823 HMMRO75330 724 aa22.03■■□□□ 1.12
SFXN1-208ENST00000507823 GNAI2P04899 355 aa22.03■■□□□ 1.12
SFXN1-208ENST00000507823 KCNQ3O43525 872 aa22.03■■□□□ 1.12
SFXN1-208ENST00000507823 PLEKHM2Q8IWE5 1019 aa22.02■■□□□ 1.12
SFXN1-208ENST00000507823 SOS2Q07890 1332 aaPredicted RBP22.02■■□□□ 1.12
SFXN1-208ENST00000507823 MEGF6O75095 1541 aa22.02■■□□□ 1.12
SFXN1-208ENST00000507823 MRC1P22897 1456 aa22.01■■□□□ 1.11
SFXN1-208ENST00000507823 RAPGEF4Q8WZA2 1011 aa22■■□□□ 1.11
SFXN1-208ENST00000507823 NECTIN2Q92692 538 aa22■■□□□ 1.11
SFXN1-208ENST00000507823 DAXXQ9UER7 740 aaPredicted RBP22■■□□□ 1.11
SFXN1-208ENST00000507823 KDM6AO15550 1401 aaPredicted RBP22■■□□□ 1.11
SFXN1-208ENST00000507823 PLEKHG5O94827 1062 aa21.99■■□□□ 1.11
SFXN1-208ENST00000507823 PHAXQ9H814 394 aaKnown RBP21.99■■□□□ 1.11
SFXN1-208ENST00000507823 GIGYF1O75420 1035 aaPredicted RBP21.99■■□□□ 1.11
SFXN1-208ENST00000507823 C22orf23Q9BZE7 217 aa21.99■■□□□ 1.11
SFXN1-208ENST00000507823 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
SFXN1-208ENST00000507823 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
SFXN1-208ENST00000507823 BECN1Q14457 450 aa21.98■■□□□ 1.11
SFXN1-208ENST00000507823 CABLES1Q8TDN4 633 aa21.98■■□□□ 1.11
SFXN1-208ENST00000507823 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
SFXN1-208ENST00000507823 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
SFXN1-208ENST00000507823 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
SFXN1-208ENST00000507823 RBM25P49756 843 aaKnown RBP21.97■■□□□ 1.11
SFXN1-208ENST00000507823 ATP8B2P98198 1209 aa21.97■■□□□ 1.11
SFXN1-208ENST00000507823 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
SFXN1-208ENST00000507823 CHPF2Q9P2E5 772 aa21.97■■□□□ 1.11
SFXN1-208ENST00000507823 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
SFXN1-208ENST00000507823 PHKG2P15735 406 aa21.97■■□□□ 1.11
SFXN1-208ENST00000507823 GSPT1P15170 499 aaKnown RBP21.96■■□□□ 1.11
SFXN1-208ENST00000507823 SLAIN2Q9P270 581 aa21.96■■□□□ 1.11
SFXN1-208ENST00000507823 DBF4Q9UBU7 674 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-208ENST00000507823 ZNF335Q9H4Z2 1342 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-208ENST00000507823 MFAP1P55081 439 aaKnown RBP21.95■■□□□ 1.11
SFXN1-208ENST00000507823 TTC22Q5TAA0 569 aa21.95■■□□□ 1.11
SFXN1-208ENST00000507823 NHSL1Q5SYE7 1610 aa21.95■■□□□ 1.1
SFXN1-208ENST00000507823 EIF2S2P20042 333 aaKnown RBP21.95■■□□□ 1.1
SFXN1-208ENST00000507823 OSBPL3Q9H4L5 887 aa21.94■■□□□ 1.1
SFXN1-208ENST00000507823 USP35Q9P2H5 1018 aa21.94■■□□□ 1.1
SFXN1-208ENST00000507823 SLC52A2Q9HAB3 445 aa21.94■■□□□ 1.1
SFXN1-208ENST00000507823 ADCY9O60503 1353 aa21.94■■□□□ 1.1
SFXN1-208ENST00000507823 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 IBTKQ9P2D0 1353 aaPredicted RBP21.93■■□□□ 1.1
SFXN1-208ENST00000507823 EIF5BO60841 1220 aaKnown RBP21.93■■□□□ 1.1
SFXN1-208ENST00000507823 TBC1D9Q6ZT07 1266 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 DNAAF4Q8WXU2 420 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 SRCIN1Q9C0H9 1055 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 CDC45O75419 566 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 CHRNA2Q15822 529 aa21.93■■□□□ 1.1
SFXN1-208ENST00000507823 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
SFXN1-208ENST00000507823 SALL3Q9BXA9 1300 aa21.92■■□□□ 1.1
SFXN1-208ENST00000507823 C5P01031 1676 aa21.91■■□□□ 1.1
SFXN1-208ENST00000507823 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
SFXN1-208ENST00000507823 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
SFXN1-208ENST00000507823 NBR1Q14596 966 aa21.91■■□□□ 1.1
SFXN1-208ENST00000507823 SSH3Q8TE77 659 aa21.91■■□□□ 1.1
SFXN1-208ENST00000507823 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
SFXN1-208ENST00000507823 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 CSB-PGBD3P0DP91 1061 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 DCAF5Q96JK2 942 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 TBC1D2Q9BYX2 928 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 PI4KAP2A4QPH2 592 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 ZNF790Q6PG37 636 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 PI4KAP1Q8N8J0 262 aa21.9■■□□□ 1.1
SFXN1-208ENST00000507823 OTUD7AQ8TE49 926 aaPredicted RBP21.9■■□□□ 1.1
SFXN1-208ENST00000507823 WDR17Q8IZU2 1322 aa21.89■■□□□ 1.1
SFXN1-208ENST00000507823 CYP27B1O15528 508 aa21.89■■□□□ 1.09
SFXN1-208ENST00000507823 POLA2Q14181 598 aa21.89■■□□□ 1.09
SFXN1-208ENST00000507823 HYPKQ9NX55 129 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms