RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
RPS3A-206ENST00000507485 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
RPS3A-206ENST00000507485 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
RPS3A-206ENST00000507485 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
RPS3A-206ENST00000507485 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
RPS3A-206ENST00000507485 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
RPS3A-206ENST00000507485 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
RPS3A-206ENST00000507485 TESK2Q96S53 571 aa12.8□□□□□ -0.36
RPS3A-206ENST00000507485 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
RPS3A-206ENST00000507485 BTAF1O14981 1849 aa12.79□□□□□ -0.36
RPS3A-206ENST00000507485 FBLN1P23142 703 aa12.79□□□□□ -0.36
RPS3A-206ENST00000507485 PTGER2P43116 358 aa12.79□□□□□ -0.36
RPS3A-206ENST00000507485 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
RPS3A-206ENST00000507485 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
RPS3A-206ENST00000507485 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
RPS3A-206ENST00000507485 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
RPS3A-206ENST00000507485 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
RPS3A-206ENST00000507485 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
RPS3A-206ENST00000507485 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
RPS3A-206ENST00000507485 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
RPS3A-206ENST00000507485 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.37
RPS3A-206ENST00000507485 IL2RBP14784 551 aa12.77□□□□□ -0.37
RPS3A-206ENST00000507485 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
RPS3A-206ENST00000507485 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
RPS3A-206ENST00000507485 YY1P25490 414 aa12.75□□□□□ -0.37
RPS3A-206ENST00000507485 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
RPS3A-206ENST00000507485 LRRC4BQ9NT99 713 aa12.75□□□□□ -0.37
RPS3A-206ENST00000507485 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
RPS3A-206ENST00000507485 IP6K1Q92551 441 aa12.74□□□□□ -0.37
RPS3A-206ENST00000507485 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
RPS3A-206ENST00000507485 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
RPS3A-206ENST00000507485 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
RPS3A-206ENST00000507485 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
RPS3A-206ENST00000507485 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
RPS3A-206ENST00000507485 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
RPS3A-206ENST00000507485 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
RPS3A-206ENST00000507485 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
RPS3A-206ENST00000507485 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
RPS3A-206ENST00000507485 HOXC9P31274 260 aa12.72□□□□□ -0.37
RPS3A-206ENST00000507485 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
RPS3A-206ENST00000507485 MEGF6O75095 1541 aa12.71□□□□□ -0.37
RPS3A-206ENST00000507485 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
RPS3A-206ENST00000507485 NSD2O96028 1365 aa12.71□□□□□ -0.37
RPS3A-206ENST00000507485 KCNQ4P56696 695 aa12.71□□□□□ -0.38
RPS3A-206ENST00000507485 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.38
RPS3A-206ENST00000507485 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.38
RPS3A-206ENST00000507485 SYT17Q9BSW7 474 aa12.7□□□□□ -0.38
RPS3A-206ENST00000507485 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
RPS3A-206ENST00000507485 COG3Q96JB2 828 aa12.69□□□□□ -0.38
RPS3A-206ENST00000507485 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
RPS3A-206ENST00000507485 LY75O60449 1722 aa12.69□□□□□ -0.38
RPS3A-206ENST00000507485 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
RPS3A-206ENST00000507485 FYB1O15117 783 aa12.68□□□□□ -0.38
RPS3A-206ENST00000507485 RRS1Q15050 365 aaKnown RBP12.68□□□□□ -0.38
RPS3A-206ENST00000507485 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
RPS3A-206ENST00000507485 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
RPS3A-206ENST00000507485 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
RPS3A-206ENST00000507485 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
RPS3A-206ENST00000507485 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
RPS3A-206ENST00000507485 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
RPS3A-206ENST00000507485 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
RPS3A-206ENST00000507485 AMPHP49418 695 aa12.67□□□□□ -0.38
RPS3A-206ENST00000507485 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
RPS3A-206ENST00000507485 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
RPS3A-206ENST00000507485 USP47Q96K76 1375 aa12.66□□□□□ -0.38
RPS3A-206ENST00000507485 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
RPS3A-206ENST00000507485 ARXQ96QS3 562 aa12.66□□□□□ -0.38
RPS3A-206ENST00000507485 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
RPS3A-206ENST00000507485 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.38
RPS3A-206ENST00000507485 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
RPS3A-206ENST00000507485 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
RPS3A-206ENST00000507485 CARD14Q9BXL6 1004 aa12.64□□□□□ -0.39
RPS3A-206ENST00000507485 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
RPS3A-206ENST00000507485 UTRNP46939 3433 aa12.63□□□□□ -0.39
RPS3A-206ENST00000507485 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
RPS3A-206ENST00000507485 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
RPS3A-206ENST00000507485 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
RPS3A-206ENST00000507485 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
RPS3A-206ENST00000507485 TMF1P82094 1093 aa12.62□□□□□ -0.39
RPS3A-206ENST00000507485 INSRP06213 1382 aa12.61□□□□□ -0.39
RPS3A-206ENST00000507485 CHD4Q14839 1912 aa12.61□□□□□ -0.39
RPS3A-206ENST00000507485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
RPS3A-206ENST00000507485 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
RPS3A-206ENST00000507485 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
RPS3A-206ENST00000507485 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
RPS3A-206ENST00000507485 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
RPS3A-206ENST00000507485 C5P01031 1676 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 CYP27B1O15528 508 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
RPS3A-206ENST00000507485 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
RPS3A-206ENST00000507485 FLT4P35916 1363 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 ANKRD26Q9UPS8 1709 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
RPS3A-206ENST00000507485 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
RPS3A-206ENST00000507485 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
RPS3A-206ENST00000507485 ITGB4P16144 1822 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms