RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
SEC24D-208ENST00000506622 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
SEC24D-208ENST00000506622 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
SEC24D-208ENST00000506622 ERVV-2B6SEH9 535 aa19.93■□□□□ 0.78
SEC24D-208ENST00000506622 GNPATO15228 680 aa19.93■□□□□ 0.78
SEC24D-208ENST00000506622 ITPK1Q13572 414 aa19.93■□□□□ 0.78
SEC24D-208ENST00000506622 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
SEC24D-208ENST00000506622 DCAF5Q96JK2 942 aa19.92■□□□□ 0.78
SEC24D-208ENST00000506622 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
SEC24D-208ENST00000506622 KNSTRNQ9Y448 316 aa19.91■□□□□ 0.78
SEC24D-208ENST00000506622 ZNF530Q6P9A1 599 aaPredicted RBP19.9■□□□□ 0.78
SEC24D-208ENST00000506622 RBM42Q9BTD8 480 aaKnown RBP19.9■□□□□ 0.78
SEC24D-208ENST00000506622 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
SEC24D-208ENST00000506622 CABP4P57796 275 aa19.88■□□□□ 0.77
SEC24D-208ENST00000506622 C1orf141Q5JVX7 400 aa19.88■□□□□ 0.77
SEC24D-208ENST00000506622 TRAPPC3LQ5T215 181 aa19.88■□□□□ 0.77
SEC24D-208ENST00000506622 RTCBQ9Y3I0 505 aaKnown RBP19.88■□□□□ 0.77
SEC24D-208ENST00000506622 CEP350Q5VT06 3117 aa19.87■□□□□ 0.77
SEC24D-208ENST00000506622 MTHFSP49914 203 aa19.87■□□□□ 0.77
SEC24D-208ENST00000506622 RC3H1Q5TC82 1133 aaKnown RBP19.85■□□□□ 0.77
SEC24D-208ENST00000506622 SULT6B1Q6IMI4 303 aa19.85■□□□□ 0.77
SEC24D-208ENST00000506622 AEBP1Q8IUX7 1158 aa19.85■□□□□ 0.77
SEC24D-208ENST00000506622 KDRP35968 1356 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 MMP10P09238 476 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 SLC4A9Q96Q91 983 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 WWC3Q9ULE0 1092 aa19.84■□□□□ 0.77
SEC24D-208ENST00000506622 ADRA2BP18089 450 aa19.83■□□□□ 0.77
SEC24D-208ENST00000506622 KDM6AO15550 1401 aaPredicted RBP19.83■□□□□ 0.76
SEC24D-208ENST00000506622 RFC4P35249 363 aa19.82■□□□□ 0.76
SEC24D-208ENST00000506622 NFATC2IPQ8NCF5 419 aa19.82■□□□□ 0.76
SEC24D-208ENST00000506622 CNTNAP4Q9C0A0 1308 aa19.82■□□□□ 0.76
SEC24D-208ENST00000506622 PTCD1O75127 700 aaKnown RBP19.81■□□□□ 0.76
SEC24D-208ENST00000506622 RPS6KA4O75676 772 aa19.81■□□□□ 0.76
SEC24D-208ENST00000506622 IL13P35225 146 aa19.81■□□□□ 0.76
SEC24D-208ENST00000506622 ARHGEF1Q92888 912 aaKnown RBP19.81■□□□□ 0.76
SEC24D-208ENST00000506622 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
SEC24D-208ENST00000506622 COL5A3P25940 1745 aaPredicted RBP19.81■□□□□ 0.76
SEC24D-208ENST00000506622 MYH14Q7Z406 1995 aaKnown RBP19.8■□□□□ 0.76
SEC24D-208ENST00000506622 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
SEC24D-208ENST00000506622 GPBP1L1Q9HC44 474 aaPredicted RBP19.79■□□□□ 0.76
SEC24D-208ENST00000506622 TGFB2P61812 414 aa19.77■□□□□ 0.76
SEC24D-208ENST00000506622 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
SEC24D-208ENST00000506622 GYS1P13807 737 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 AKAP4Q5JQC9 854 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 CCDC87Q9NVE4 849 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 KIF13BQ9NQT8 1826 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 SCN11AQ9UI33 1791 aa19.76■□□□□ 0.75
SEC24D-208ENST00000506622 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
SEC24D-208ENST00000506622 CRKLP46109 303 aaKnown RBP19.76■□□□□ 0.75
SEC24D-208ENST00000506622 ZNF526Q8TF50 670 aaPredicted RBP19.76■□□□□ 0.75
SEC24D-208ENST00000506622 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
SEC24D-208ENST00000506622 A0A0G2JLW4 131 aa19.75■□□□□ 0.75
SEC24D-208ENST00000506622 ADCY9O60503 1353 aa19.74■□□□□ 0.75
SEC24D-208ENST00000506622 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
SEC24D-208ENST00000506622 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
SEC24D-208ENST00000506622 HMOX1P09601 288 aa19.73■□□□□ 0.75
SEC24D-208ENST00000506622 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
SEC24D-208ENST00000506622 BCS1LQ9Y276 419 aa19.73■□□□□ 0.75
SEC24D-208ENST00000506622 CC2D1BQ5T0F9 858 aaKnown RBP19.72■□□□□ 0.75
SEC24D-208ENST00000506622 LGR6Q9HBX8 967 aa19.72■□□□□ 0.75
SEC24D-208ENST00000506622 C10orf71Q711Q0 1435 aa19.72■□□□□ 0.75
SEC24D-208ENST00000506622 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
SEC24D-208ENST00000506622 DIAPH1O60610 1272 aaKnown RBP19.71■□□□□ 0.75
SEC24D-208ENST00000506622 VIRMAQ69YN4 1812 aaKnown RBP19.7■□□□□ 0.74
SEC24D-208ENST00000506622 DPEP1P16444 411 aa19.7■□□□□ 0.74
SEC24D-208ENST00000506622 SRP68Q9UHB9 627 aaKnown RBP19.7■□□□□ 0.74
SEC24D-208ENST00000506622 USP42Q9H9J4 1324 aaKnown RBP19.7■□□□□ 0.74
SEC24D-208ENST00000506622 TJP1Q07157 1748 aa19.69■□□□□ 0.74
SEC24D-208ENST00000506622 KIAA1551Q9HCM1 1747 aa19.69■□□□□ 0.74
SEC24D-208ENST00000506622 RNMTO43148 476 aaKnown RBP19.69■□□□□ 0.74
SEC24D-208ENST00000506622 FCHSD2O94868 740 aa19.69■□□□□ 0.74
SEC24D-208ENST00000506622 FKBP8Q14318 412 aa19.69■□□□□ 0.74
SEC24D-208ENST00000506622 INTS5Q6P9B9 1019 aaKnown RBP19.69■□□□□ 0.74
SEC24D-208ENST00000506622 ARHGAP27Q6ZUM4 889 aa19.69■□□□□ 0.74
SEC24D-208ENST00000506622 ZPR1O75312 459 aa19.68■□□□□ 0.74
SEC24D-208ENST00000506622 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
SEC24D-208ENST00000506622 DNAJC10Q8IXB1 793 aa19.68■□□□□ 0.74
SEC24D-208ENST00000506622 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
SEC24D-208ENST00000506622 PIM2Q9P1W9 311 aa19.66■□□□□ 0.74
SEC24D-208ENST00000506622 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
SEC24D-208ENST00000506622 CYP19A1P11511 503 aaPredicted RBP19.65■□□□□ 0.74
SEC24D-208ENST00000506622 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
SEC24D-208ENST00000506622 DDR1Q08345 913 aa19.64■□□□□ 0.73
SEC24D-208ENST00000506622 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
SEC24D-208ENST00000506622 MRC1P22897 1456 aa19.64■□□□□ 0.73
SEC24D-208ENST00000506622 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
SEC24D-208ENST00000506622 KCNA3P22001 575 aa19.63■□□□□ 0.73
SEC24D-208ENST00000506622 TM4SF1P30408 202 aa19.63■□□□□ 0.73
SEC24D-208ENST00000506622 ARFGEF1Q9Y6D6 1849 aa19.62■□□□□ 0.73
SEC24D-208ENST00000506622 SOS1Q07889 1333 aaPredicted RBP19.62■□□□□ 0.73
SEC24D-208ENST00000506622 HSPA6P17066 643 aa19.62■□□□□ 0.73
SEC24D-208ENST00000506622 DALRD3Q5D0E6 543 aaKnown RBP19.62■□□□□ 0.73
SEC24D-208ENST00000506622 VSIG10Q8N0Z9 540 aa19.62■□□□□ 0.73
SEC24D-208ENST00000506622 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
SEC24D-208ENST00000506622 POLRMTO00411 1230 aaKnown RBP19.61■□□□□ 0.73
SEC24D-208ENST00000506622 KIF3CO14782 793 aa19.61■□□□□ 0.73
SEC24D-208ENST00000506622 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms