RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
NIPBL-205ENST00000505998 INSM2Q96T92 566 aaPredicted RBP10.79□□□□□ -0.68
NIPBL-205ENST00000505998 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
NIPBL-205ENST00000505998 POLMQ9NP87 494 aaPredicted RBP10.79□□□□□ -0.68
NIPBL-205ENST00000505998 SERTAD1Q9UHV2 236 aa10.79□□□□□ -0.68
NIPBL-205ENST00000505998 BACH1O14867 736 aa10.78□□□□□ -0.68
NIPBL-205ENST00000505998 SEC13P55735 322 aa10.78□□□□□ -0.68
NIPBL-205ENST00000505998 FAM200AQ8TCP9 573 aa10.78□□□□□ -0.68
NIPBL-205ENST00000505998 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
NIPBL-205ENST00000505998 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
NIPBL-205ENST00000505998 DKK1O94907 266 aa10.77□□□□□ -0.69
NIPBL-205ENST00000505998 ARXQ96QS3 562 aa10.77□□□□□ -0.69
NIPBL-205ENST00000505998 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
NIPBL-205ENST00000505998 CTSOP43234 321 aaPredicted RBP10.76□□□□□ -0.69
NIPBL-205ENST00000505998 ZMIZ1Q9ULJ6 1067 aa10.76□□□□□ -0.69
NIPBL-205ENST00000505998 TLR1Q15399 786 aa10.75□□□□□ -0.69
NIPBL-205ENST00000505998 M0R2N6 131 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 LCE2BO14633 110 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 GPC1P35052 558 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 RNF144AP50876 292 aaPredicted RBP10.74□□□□□ -0.69
NIPBL-205ENST00000505998 CENPCQ03188 943 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 SLC27A3Q5K4L6 730 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 STK32AQ8WU08 396 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 SLC4A9Q96Q91 983 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 HRH3Q9Y5N1 445 aa10.74□□□□□ -0.69
NIPBL-205ENST00000505998 TTLL8A6PVC2 850 aa10.73□□□□□ -0.69
NIPBL-205ENST00000505998 SMTNP53814 917 aa10.73□□□□□ -0.69
NIPBL-205ENST00000505998 TSEN2Q8NCE0 465 aaKnown RBP10.73□□□□□ -0.69
NIPBL-205ENST00000505998 HINFPQ9BQA5 517 aa10.73□□□□□ -0.69
NIPBL-205ENST00000505998 A6NJY4 79 aa10.72□□□□□ -0.69
NIPBL-205ENST00000505998 GTF2E1P29083 439 aaPredicted RBP10.72□□□□□ -0.69
NIPBL-205ENST00000505998 TMEM164Q5U3C3 297 aa10.72□□□□□ -0.69
NIPBL-205ENST00000505998 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
NIPBL-205ENST00000505998 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
NIPBL-205ENST00000505998 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
NIPBL-205ENST00000505998 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
NIPBL-205ENST00000505998 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
NIPBL-205ENST00000505998 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
NIPBL-205ENST00000505998 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
NIPBL-205ENST00000505998 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
NIPBL-205ENST00000505998 RNF217Q8TC41 542 aa10.7□□□□□ -0.7
NIPBL-205ENST00000505998 FHDC1Q9C0D6 1143 aaPredicted RBP10.7□□□□□ -0.7
NIPBL-205ENST00000505998 GRIP2Q9C0E4 1043 aa10.7□□□□□ -0.7
NIPBL-205ENST00000505998 MAN1A2O60476 641 aa10.69□□□□□ -0.7
NIPBL-205ENST00000505998 MTFR1Q15390 333 aa10.69□□□□□ -0.7
NIPBL-205ENST00000505998 TMEM214Q6NUQ4 689 aaKnown RBP10.69□□□□□ -0.7
NIPBL-205ENST00000505998 TRIM47Q96LD4 638 aa10.69□□□□□ -0.7
NIPBL-205ENST00000505998 EPHA4P54764 986 aa10.68□□□□□ -0.7
NIPBL-205ENST00000505998 SWI5Q1ZZU3 235 aa10.68□□□□□ -0.7
NIPBL-205ENST00000505998 LYSMD3Q7Z3D4 306 aa10.68□□□□□ -0.7
NIPBL-205ENST00000505998 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
NIPBL-205ENST00000505998 USTQ9Y2C2 406 aa10.68□□□□□ -0.7
NIPBL-205ENST00000505998 CDK2AP1O14519 115 aa10.67□□□□□ -0.7
NIPBL-205ENST00000505998 PDE4CQ08493 712 aa10.67□□□□□ -0.7
NIPBL-205ENST00000505998 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
NIPBL-205ENST00000505998 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
NIPBL-205ENST00000505998 SCHIP1Q9P0W5 487 aaPredicted RBP10.67□□□□□ -0.7
NIPBL-205ENST00000505998 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
NIPBL-205ENST00000505998 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
NIPBL-205ENST00000505998 LGR5O75473 907 aa10.66□□□□□ -0.7
NIPBL-205ENST00000505998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.66□□□□□ -0.7
NIPBL-205ENST00000505998 PPARGC1BQ86YN6 1023 aaKnown RBP10.66□□□□□ -0.7
NIPBL-205ENST00000505998 SLC9A9Q8IVB4 645 aa10.66□□□□□ -0.7
NIPBL-205ENST00000505998 RHBDD1Q8TEB9 315 aa10.66□□□□□ -0.7
NIPBL-205ENST00000505998 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.7
NIPBL-205ENST00000505998 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
NIPBL-205ENST00000505998 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
NIPBL-205ENST00000505998 SOBPA7XYQ1 873 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 FOXK2Q01167 660 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 POU4F2Q12837 409 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 TAS1R3Q7RTX0 852 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
NIPBL-205ENST00000505998 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
NIPBL-205ENST00000505998 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
NIPBL-205ENST00000505998 SCG3Q8WXD2 468 aaKnown RBP10.63□□□□□ -0.71
NIPBL-205ENST00000505998 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
NIPBL-205ENST00000505998 NIFKQ9BYG3 293 aaKnown RBP10.63□□□□□ -0.71
NIPBL-205ENST00000505998 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
NIPBL-205ENST00000505998 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
NIPBL-205ENST00000505998 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 POTECB2RU33 542 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 PPP1R12BO60237 982 aaPredicted RBP10.62□□□□□ -0.71
NIPBL-205ENST00000505998 PRMT3O60678 531 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 RHOQP17081 205 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
NIPBL-205ENST00000505998 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
NIPBL-205ENST00000505998 IGFBP4P22692 258 aa10.61□□□□□ -0.71
NIPBL-205ENST00000505998 PHKA2P46019 1235 aa10.61□□□□□ -0.71
NIPBL-205ENST00000505998 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
NIPBL-205ENST00000505998 PRIMPOLQ96LW4 560 aa10.61□□□□□ -0.71
NIPBL-205ENST00000505998 WEE1P30291 646 aa10.6□□□□□ -0.71
NIPBL-205ENST00000505998 PLA2G4AP47712 749 aa10.6□□□□□ -0.71
NIPBL-205ENST00000505998 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
NIPBL-205ENST00000505998 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
NIPBL-205ENST00000505998 C21orf2O43822 256 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms