RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
TRAPPC11-204ENST00000505676 CRYBG1Q9Y4K1 1723 aa21.61■■□□□ 1.05
TRAPPC11-204ENST00000505676 HSPA2P54652 639 aa21.61■■□□□ 1.05
TRAPPC11-204ENST00000505676 COL18A1P39060 1754 aa21.61■■□□□ 1.05
TRAPPC11-204ENST00000505676 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
TRAPPC11-204ENST00000505676 SIRT2Q8IXJ6 389 aa21.6■■□□□ 1.05
TRAPPC11-204ENST00000505676 GNAI3P08754 354 aa21.6■■□□□ 1.05
TRAPPC11-204ENST00000505676 EIF4A1P60842 406 aaKnown RBP21.6■■□□□ 1.05
TRAPPC11-204ENST00000505676 BMP2KLQ5H9B9 411 aa21.6■■□□□ 1.05
TRAPPC11-204ENST00000505676 HDGFL1Q5TGJ6 251 aa21.59■■□□□ 1.05
TRAPPC11-204ENST00000505676 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
TRAPPC11-204ENST00000505676 RAPGEF4Q8WZA2 1011 aa21.59■■□□□ 1.05
TRAPPC11-204ENST00000505676 C1orf115Q9H7X2 142 aa21.59■■□□□ 1.05
TRAPPC11-204ENST00000505676 AXIN2Q9Y2T1 843 aa21.59■■□□□ 1.05
TRAPPC11-204ENST00000505676 CEP85Q6P2H3 762 aa21.58■■□□□ 1.05
TRAPPC11-204ENST00000505676 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
TRAPPC11-204ENST00000505676 LNPKQ9C0E8 428 aa21.57■■□□□ 1.04
TRAPPC11-204ENST00000505676 SPG7Q9UQ90 795 aa21.57■■□□□ 1.04
TRAPPC11-204ENST00000505676 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC11-204ENST00000505676 FKBP5Q13451 457 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC11-204ENST00000505676 G2E3Q7L622 706 aa21.56■■□□□ 1.04
TRAPPC11-204ENST00000505676 KDM4FA0A1W2PPD8 638 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 GNAI2P04899 355 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 ZC3H6P61129 1189 aaKnown RBP21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 LGR6Q9HBX8 967 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 BECN1Q14457 450 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
TRAPPC11-204ENST00000505676 RGPD5Q99666 1765 aa21.54■■□□□ 1.04
TRAPPC11-204ENST00000505676 MEIS3Q99687 375 aa21.54■■□□□ 1.04
TRAPPC11-204ENST00000505676 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
TRAPPC11-204ENST00000505676 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
TRAPPC11-204ENST00000505676 SOS2Q07890 1332 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC11-204ENST00000505676 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
TRAPPC11-204ENST00000505676 SLC4A10Q6U841 1118 aa21.52■■□□□ 1.04
TRAPPC11-204ENST00000505676 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
TRAPPC11-204ENST00000505676 NLRP2Q9NX02 1062 aa21.51■■□□□ 1.03
TRAPPC11-204ENST00000505676 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC11-204ENST00000505676 PKD1L3Q7Z443 1732 aa21.5■■□□□ 1.03
TRAPPC11-204ENST00000505676 SEC24BO95487 1268 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 SLAIN2Q9P270 581 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 MRC1P22897 1456 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 F6X3S4 739 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 IFNL2Q8IZJ0 200 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 HDAC5Q9UQL6 1122 aa21.49■■□□□ 1.03
TRAPPC11-204ENST00000505676 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
TRAPPC11-204ENST00000505676 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC11-204ENST00000505676 DDX17Q92841 729 aaKnown RBP21.47■■□□□ 1.03
TRAPPC11-204ENST00000505676 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC11-204ENST00000505676 PHKG2P15735 406 aa21.46■■□□□ 1.03
TRAPPC11-204ENST00000505676 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
TRAPPC11-204ENST00000505676 PARP4Q9UKK3 1724 aaKnown RBP21.46■■□□□ 1.03
TRAPPC11-204ENST00000505676 DCAF5Q96JK2 942 aa21.45■■□□□ 1.03
TRAPPC11-204ENST00000505676 USP35Q9P2H5 1018 aa21.45■■□□□ 1.03
TRAPPC11-204ENST00000505676 MEGF6O75095 1541 aa21.45■■□□□ 1.02
TRAPPC11-204ENST00000505676 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
TRAPPC11-204ENST00000505676 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
TRAPPC11-204ENST00000505676 SLC52A2Q9HAB3 445 aa21.45■■□□□ 1.02
TRAPPC11-204ENST00000505676 HYPKQ9NX55 129 aa21.45■■□□□ 1.02
TRAPPC11-204ENST00000505676 ZNF335Q9H4Z2 1342 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 PLEKHM2Q8IWE5 1019 aa21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
TRAPPC11-204ENST00000505676 NHSL1Q5SYE7 1610 aa21.43■■□□□ 1.02
TRAPPC11-204ENST00000505676 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
TRAPPC11-204ENST00000505676 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
TRAPPC11-204ENST00000505676 KDM6AO15550 1401 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC11-204ENST00000505676 CDC45O75419 566 aa21.43■■□□□ 1.02
TRAPPC11-204ENST00000505676 WDR17Q8IZU2 1322 aa21.42■■□□□ 1.02
TRAPPC11-204ENST00000505676 ALDH1L1O75891 902 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 RBM25P49756 843 aaKnown RBP21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 TTC22Q5TAA0 569 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 OSBPL3Q9H4L5 887 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 DDX58O95786 925 aaKnown RBP21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 USP44Q9H0E7 712 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 PRDM11Q9NQV5 511 aa21.41■■□□□ 1.02
TRAPPC11-204ENST00000505676 KCNQ3O43525 872 aa21.4■■□□□ 1.02
TRAPPC11-204ENST00000505676 MFAP1P55081 439 aaKnown RBP21.4■■□□□ 1.02
TRAPPC11-204ENST00000505676 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
TRAPPC11-204ENST00000505676 PHAXQ9H814 394 aaKnown RBP21.4■■□□□ 1.02
TRAPPC11-204ENST00000505676 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
TRAPPC11-204ENST00000505676 BEND3Q5T5X7 828 aa21.39■■□□□ 1.01
TRAPPC11-204ENST00000505676 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRAPPC11-204ENST00000505676 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
TRAPPC11-204ENST00000505676 RTL5Q5HYW3 569 aaPredicted RBP21.39■■□□□ 1.01
TRAPPC11-204ENST00000505676 CASC1Q6TDU7 716 aa21.39■■□□□ 1.01
TRAPPC11-204ENST00000505676 RAB11FIP3O75154 756 aa21.38■■□□□ 1.01
TRAPPC11-204ENST00000505676 KSR2Q6VAB6 950 aa21.38■■□□□ 1.01
TRAPPC11-204ENST00000505676 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC11-204ENST00000505676 PCDH11XQ9BZA7 1347 aa21.37■■□□□ 1.01
TRAPPC11-204ENST00000505676 PCDH11YQ9BZA8 1340 aa21.37■■□□□ 1.01
TRAPPC11-204ENST00000505676 SSH3Q8TE77 659 aa21.37■■□□□ 1.01
TRAPPC11-204ENST00000505676 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
TRAPPC11-204ENST00000505676 ADCY9O60503 1353 aa21.37■■□□□ 1.01
TRAPPC11-204ENST00000505676 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
TRAPPC11-204ENST00000505676 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms