RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 FLIIQ13045 1269 aa19.65■□□□□ 0.74
DDX41-205ENST00000505081 STK31Q9BXU1 1019 aa19.65■□□□□ 0.74
DDX41-205ENST00000505081 NOL8Q76FK4 1167 aaKnown RBP19.65■□□□□ 0.74
DDX41-205ENST00000505081 LTV1Q96GA3 475 aaPredicted RBP19.65■□□□□ 0.74
DDX41-205ENST00000505081 FLT4P35916 1363 aa19.64■□□□□ 0.74
DDX41-205ENST00000505081 PRPF40AO75400 957 aaKnown RBP19.64■□□□□ 0.73
DDX41-205ENST00000505081 PRKCSHP14314 528 aaPredicted RBP19.64■□□□□ 0.73
DDX41-205ENST00000505081 NASPP49321 788 aaPredicted RBP19.64■□□□□ 0.73
DDX41-205ENST00000505081 NEK4P51957 841 aa19.64■□□□□ 0.73
DDX41-205ENST00000505081 OSBPL3Q9H4L5 887 aa19.64■□□□□ 0.73
DDX41-205ENST00000505081 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.73
DDX41-205ENST00000505081 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
DDX41-205ENST00000505081 SBNO1A3KN83 1393 aa19.64■□□□□ 0.73
DDX41-205ENST00000505081 RILPL2Q969X0 211 aa19.63■□□□□ 0.73
DDX41-205ENST00000505081 IGSF1Q8N6C5 1336 aa19.63■□□□□ 0.73
DDX41-205ENST00000505081 LRRCC1Q9C099 1032 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 LRRFIP2Q9Y608 721 aaKnown RBP19.62■□□□□ 0.73
DDX41-205ENST00000505081 PLEKHG1Q9ULL1 1385 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 SALL3Q9BXA9 1300 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 KDRP35968 1356 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 TRIM6-TRIM34B2RNG4 842 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 NLRP6P59044 892 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 UNC5CLQ8IV45 518 aa19.62■□□□□ 0.73
DDX41-205ENST00000505081 FMN2Q9NZ56 1722 aa19.61■□□□□ 0.73
DDX41-205ENST00000505081 ZSCAN23Q3MJ62 389 aa19.61■□□□□ 0.73
DDX41-205ENST00000505081 RGPD8O14715 1765 aaPredicted RBP19.61■□□□□ 0.73
DDX41-205ENST00000505081 MX1P20591 662 aa19.61■□□□□ 0.73
DDX41-205ENST00000505081 GPT2Q8TD30 523 aa19.61■□□□□ 0.73
DDX41-205ENST00000505081 ESYT1Q9BSJ8 1104 aa19.61■□□□□ 0.73
DDX41-205ENST00000505081 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
DDX41-205ENST00000505081 IL17REQ8NFR9 667 aa19.6■□□□□ 0.73
DDX41-205ENST00000505081 CWC22Q9HCG8 908 aaKnown RBP19.6■□□□□ 0.73
DDX41-205ENST00000505081 TTC21AQ8NDW8 1320 aa19.6■□□□□ 0.73
DDX41-205ENST00000505081 TMX3Q96JJ7 454 aa19.6■□□□□ 0.73
DDX41-205ENST00000505081 IL1RAPL2Q9NP60 686 aa19.6■□□□□ 0.73
DDX41-205ENST00000505081 NSFL1CQ9UNZ2 370 aaKnown RBP19.6■□□□□ 0.73
DDX41-205ENST00000505081 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
DDX41-205ENST00000505081 ATP8B2P98198 1209 aa19.59■□□□□ 0.73
DDX41-205ENST00000505081 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
DDX41-205ENST00000505081 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
DDX41-205ENST00000505081 IL25Q9H293 177 aa19.58■□□□□ 0.73
DDX41-205ENST00000505081 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.73
DDX41-205ENST00000505081 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
DDX41-205ENST00000505081 CHMLP26374 656 aa19.57■□□□□ 0.72
DDX41-205ENST00000505081 RBSNQ9H1K0 784 aa19.57■□□□□ 0.72
DDX41-205ENST00000505081 GNAI3P08754 354 aa19.57■□□□□ 0.72
DDX41-205ENST00000505081 HOXC9P31274 260 aa19.57■□□□□ 0.72
DDX41-205ENST00000505081 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
DDX41-205ENST00000505081 ZNF445P59923 1031 aa19.56■□□□□ 0.72
DDX41-205ENST00000505081 NUTM1Q86Y26 1132 aa19.56■□□□□ 0.72
DDX41-205ENST00000505081 UPF3BQ9BZI7 483 aaKnown RBP19.56■□□□□ 0.72
DDX41-205ENST00000505081 USP44Q9H0E7 712 aa19.56■□□□□ 0.72
DDX41-205ENST00000505081 IBTKQ9P2D0 1353 aaPredicted RBP19.56■□□□□ 0.72
DDX41-205ENST00000505081 CCDC173Q0VFZ6 552 aa19.56■□□□□ 0.72
DDX41-205ENST00000505081 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
DDX41-205ENST00000505081 FOXD4L6Q3SYB3 417 aaPredicted RBP19.55■□□□□ 0.72
DDX41-205ENST00000505081 FOXD4L3Q6VB84 417 aaPredicted RBP19.55■□□□□ 0.72
DDX41-205ENST00000505081 PPP1R9BQ96SB3 815 aa19.55■□□□□ 0.72
DDX41-205ENST00000505081 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
DDX41-205ENST00000505081 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
DDX41-205ENST00000505081 TMEM63CQ9P1W3 806 aa19.54■□□□□ 0.72
DDX41-205ENST00000505081 XRN1Q8IZH2 1706 aaKnown RBP19.53■□□□□ 0.72
DDX41-205ENST00000505081 EIF2S2P20042 333 aaKnown RBP19.53■□□□□ 0.72
DDX41-205ENST00000505081 FAM208AQ9UK61 1670 aaKnown RBP19.53■□□□□ 0.72
DDX41-205ENST00000505081 DIP2AQ14689 1571 aa19.52■□□□□ 0.72
DDX41-205ENST00000505081 UBTFL1P0CB47 393 aaPredicted RBP19.52■□□□□ 0.72
DDX41-205ENST00000505081 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.72
DDX41-205ENST00000505081 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.72
DDX41-205ENST00000505081 ABTB2Q8N961 1025 aa19.52■□□□□ 0.71
DDX41-205ENST00000505081 ANP32BQ92688 251 aaKnown RBP19.52■□□□□ 0.71
DDX41-205ENST00000505081 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
DDX41-205ENST00000505081 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
DDX41-205ENST00000505081 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
DDX41-205ENST00000505081 SYCE3A1L190 88 aa19.51■□□□□ 0.71
DDX41-205ENST00000505081 HTATSF1O43719 755 aaKnown RBP19.51■□□□□ 0.71
DDX41-205ENST00000505081 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
DDX41-205ENST00000505081 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
DDX41-205ENST00000505081 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
DDX41-205ENST00000505081 ANXA1P04083 346 aa19.5■□□□□ 0.71
DDX41-205ENST00000505081 MCCP23508 829 aa19.5■□□□□ 0.71
DDX41-205ENST00000505081 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
DDX41-205ENST00000505081 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
DDX41-205ENST00000505081 RBM33Q96EV2 1170 aaKnown RBP19.49■□□□□ 0.71
DDX41-205ENST00000505081 TBX22Q9Y458 520 aa19.49■□□□□ 0.71
DDX41-205ENST00000505081 LRRC37A3O60309 1634 aa19.49■□□□□ 0.71
DDX41-205ENST00000505081 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 BRD1O95696 1058 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 CUL4AQ13619 759 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
DDX41-205ENST00000505081 GDPD2Q9HCC8 539 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 KCNQ3O43525 872 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
DDX41-205ENST00000505081 KCNA6P17658 529 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
DDX41-205ENST00000505081 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
DDX41-205ENST00000505081 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
DDX41-205ENST00000505081 SETD1BQ9UPS6 1966 aaKnown RBP19.47■□□□□ 0.71
DDX41-205ENST00000505081 DTNBO60941 627 aa19.47■□□□□ 0.71
DDX41-205ENST00000505081 ZSCAN30Q86W11 494 aa19.47■□□□□ 0.71
DDX41-205ENST00000505081 RNF214Q8ND24 703 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms