RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 GNPATO15228 680 aa10.61□□□□□ -0.71
MATR3-210ENST00000504643 PHF14O94880 888 aa10.61□□□□□ -0.71
MATR3-210ENST00000504643 LINC00116Q8NCU8 138 aa10.61□□□□□ -0.71
MATR3-210ENST00000504643 C4BP0C0L5 1744 aa10.61□□□□□ -0.71
MATR3-210ENST00000504643 YBX3P16989 372 aaKnown RBP eCLIP10.61□□□□□ -0.718e-10■■■■□ 19.9
MATR3-210ENST00000504643 TGFB2P61812 414 aa10.61□□□□□ -0.71
MATR3-210ENST00000504643 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
MATR3-210ENST00000504643 MAP2P11137 1827 aaKnown RBP10.6□□□□□ -0.71
MATR3-210ENST00000504643 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
MATR3-210ENST00000504643 MTHFSP49914 203 aa10.6□□□□□ -0.71
MATR3-210ENST00000504643 TUBGCP6Q96RT7 1819 aa10.6□□□□□ -0.71
MATR3-210ENST00000504643 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
MATR3-210ENST00000504643 CNTNAP4Q9C0A0 1308 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 RPS6KA4O75676 772 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
MATR3-210ENST00000504643 RFC4P35249 363 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 ITPK1Q13572 414 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 ITGB4P16144 1822 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
MATR3-210ENST00000504643 GPBP1L1Q9HC44 474 aaPredicted RBP10.58□□□□□ -0.72
MATR3-210ENST00000504643 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
MATR3-210ENST00000504643 MMP10P09238 476 aa10.57□□□□□ -0.72
MATR3-210ENST00000504643 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
MATR3-210ENST00000504643 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
MATR3-210ENST00000504643 KDRP35968 1356 aa10.56□□□□□ -0.72
MATR3-210ENST00000504643 AKAP4Q5JQC9 854 aa10.56□□□□□ -0.72
MATR3-210ENST00000504643 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
MATR3-210ENST00000504643 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
MATR3-210ENST00000504643 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
MATR3-210ENST00000504643 IL13P35225 146 aa10.55□□□□□ -0.72
MATR3-210ENST00000504643 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
MATR3-210ENST00000504643 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
MATR3-210ENST00000504643 NFATC2IPQ8NCF5 419 aa10.55□□□□□ -0.72
MATR3-210ENST00000504643 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
MATR3-210ENST00000504643 GYS1P13807 737 aa10.53□□□□□ -0.72
MATR3-210ENST00000504643 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
MATR3-210ENST00000504643 SLC4A9Q96Q91 983 aa10.53□□□□□ -0.72
MATR3-210ENST00000504643 PTCD1O75127 700 aaKnown RBP10.53□□□□□ -0.72
MATR3-210ENST00000504643 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
MATR3-210ENST00000504643 ADCY9O60503 1353 aa10.52□□□□□ -0.72
MATR3-210ENST00000504643 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
MATR3-210ENST00000504643 CRKLP46109 303 aaKnown RBP10.52□□□□□ -0.73
MATR3-210ENST00000504643 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
MATR3-210ENST00000504643 DIAPH1O60610 1272 aaKnown RBP10.52□□□□□ -0.73
MATR3-210ENST00000504643 ZPR1O75312 459 aa10.52□□□□□ -0.73
MATR3-210ENST00000504643 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
MATR3-210ENST00000504643 PIM2Q9P1W9 311 aa10.51□□□□□ -0.73
MATR3-210ENST00000504643 BCS1LQ9Y276 419 aa10.51□□□□□ -0.73
MATR3-210ENST00000504643 SMIM5Q71RC9 77 aa10.51□□□□□ -0.73
MATR3-210ENST00000504643 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
MATR3-210ENST00000504643 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
MATR3-210ENST00000504643 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
MATR3-210ENST00000504643 TEX13AQ9BXU3 409 aaPredicted RBP10.5□□□□□ -0.73
MATR3-210ENST00000504643 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
MATR3-210ENST00000504643 A0A0G2JLW4 131 aa10.5□□□□□ -0.73
MATR3-210ENST00000504643 FCHSD2O94868 740 aa10.5□□□□□ -0.73
MATR3-210ENST00000504643 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
MATR3-210ENST00000504643 HSPA6P17066 643 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 A0A087WZG4 1122 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
MATR3-210ENST00000504643 DPEP1P16444 411 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 DALRD3Q5D0E6 543 aaKnown RBP10.49□□□□□ -0.73
MATR3-210ENST00000504643 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
MATR3-210ENST00000504643 STARD3NLO95772 234 aa10.48□□□□□ -0.73
MATR3-210ENST00000504643 TM4SF1P30408 202 aa10.48□□□□□ -0.73
MATR3-210ENST00000504643 INTS5Q6P9B9 1019 aaKnown RBP10.48□□□□□ -0.73
MATR3-210ENST00000504643 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
MATR3-210ENST00000504643 TTC5Q8N0Z6 440 aa10.48□□□□□ -0.73
MATR3-210ENST00000504643 NARFQ9UHQ1 456 aa10.48□□□□□ -0.73
MATR3-210ENST00000504643 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
MATR3-210ENST00000504643 TOMM70O94826 608 aa10.47□□□□□ -0.73
MATR3-210ENST00000504643 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
MATR3-210ENST00000504643 FKBP8Q14318 412 aa10.47□□□□□ -0.73
MATR3-210ENST00000504643 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
MATR3-210ENST00000504643 ZNF526Q8TF50 670 aaPredicted RBP10.47□□□□□ -0.73
MATR3-210ENST00000504643 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
MATR3-210ENST00000504643 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
MATR3-210ENST00000504643 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.73
MATR3-210ENST00000504643 C4AP0C0L4 1744 aa10.46□□□□□ -0.73
MATR3-210ENST00000504643 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.73
MATR3-210ENST00000504643 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.73
MATR3-210ENST00000504643 HMOX1P09601 288 aa10.46□□□□□ -0.73
MATR3-210ENST00000504643 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
MATR3-210ENST00000504643 DNAJC10Q8IXB1 793 aa10.46□□□□□ -0.73
MATR3-210ENST00000504643 KDM2BQ8NHM5 1336 aa10.46□□□□□ -0.74
MATR3-210ENST00000504643 APLP1P51693 650 aa10.46□□□□□ -0.74
MATR3-210ENST00000504643 TEFQ10587 303 aa10.46□□□□□ -0.74
MATR3-210ENST00000504643 NUDCQ9Y266 331 aa10.46□□□□□ -0.74
MATR3-210ENST00000504643 ZC3H4Q9UPT8 1303 aaKnown RBP10.45□□□□□ -0.74
MATR3-210ENST00000504643 GNAT3A8MTJ3 354 aa10.45□□□□□ -0.74
MATR3-210ENST00000504643 POLRMTO00411 1230 aaKnown RBP10.45□□□□□ -0.74
MATR3-210ENST00000504643 KIF3CO14782 793 aa10.45□□□□□ -0.74
MATR3-210ENST00000504643 KCNA3P22001 575 aa10.45□□□□□ -0.74
MATR3-210ENST00000504643 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
MATR3-210ENST00000504643 SRP68Q9UHB9 627 aaKnown RBP10.45□□□□□ -0.74
MATR3-210ENST00000504643 USPL1Q5W0Q7 1092 aa10.45□□□□□ -0.74
MATR3-210ENST00000504643 C16orf71Q8IYS4 520 aaPredicted RBP10.45□□□□□ -0.74
MATR3-210ENST00000504643 WWC3Q9ULE0 1092 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms