RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.31
NIPBL-204ENST00000504430 S100BP04271 92 aaPredicted RBP6.9□□□□□ -1.31
NIPBL-204ENST00000504430 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.31
NIPBL-204ENST00000504430 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.31
NIPBL-204ENST00000504430 ARID5AQ03989 594 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 PSMD2Q13200 908 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 NKX2-3Q8TAU0 364 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 JPH4Q96JJ6 628 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 GPR182O15218 404 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 TIE1P35590 1138 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 ATN1P54259 1190 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-204ENST00000504430 PNMA1Q8ND90 353 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 TREHO43280 583 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 RBL2Q08999 1139 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 IER2Q9BTL4 223 aa6.89□□□□□ -1.31
NIPBL-204ENST00000504430 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
NIPBL-204ENST00000504430 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 NFATC2IPQ8NCF5 419 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 F6X3S4 739 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 STAU1O95793 577 aaKnown RBP6.88□□□□□ -1.31
NIPBL-204ENST00000504430 EHHADHQ08426 723 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 SAP130Q9H0E3 1048 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 MRVI1Q9Y6F6 885 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 CTSHP09668 335 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 OCSTAMPQ9BR26 566 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
NIPBL-204ENST00000504430 C1orf216Q8TAB5 229 aa6.87□□□□□ -1.31
NIPBL-204ENST00000504430 CERKQ8TCT0 537 aa6.87□□□□□ -1.31
NIPBL-204ENST00000504430 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
NIPBL-204ENST00000504430 PPP4CP60510 307 aa6.87□□□□□ -1.31
NIPBL-204ENST00000504430 MPHOSPH6Q99547 160 aaKnown RBP6.87□□□□□ -1.31
NIPBL-204ENST00000504430 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
NIPBL-204ENST00000504430 TNFRSF10BO14763 440 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 PROX2Q3B8N5 592 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 ATCAYQ86WG3 371 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.315e-6■□□□□ 8.9
NIPBL-204ENST00000504430 OCEL1Q9H607 264 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 NRBP1Q9UHY1 535 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 FMR1Q06787 632 aaKnown RBP eCLIP6.86□□□□□ -1.31
NIPBL-204ENST00000504430 RNF187Q5TA31 235 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-204ENST00000504430 TRAF7Q6Q0C0 670 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 GMLQ99445 158 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 MAP3K20Q9NYL2 800 aaKnown RBP6.86□□□□□ -1.31
NIPBL-204ENST00000504430 SEC13P55735 322 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 GTF2IP78347 998 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 TATDN2Q93075 761 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 IL17RAQ96F46 866 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 PCDHGA4Q9Y5G9 962 aa6.86□□□□□ -1.31
NIPBL-204ENST00000504430 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 FGRP09769 529 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 ODR4Q5SWX8 454 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 USP5P45974 858 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 EML3Q32P44 896 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 SLC43A3Q8NBI5 491 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 SPC25Q9HBM1 224 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 ZNF500O60304 480 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 NUDT7P0C024 238 aa6.85□□□□□ -1.31
NIPBL-204ENST00000504430 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 CCDC85AQ96PX6 553 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-204ENST00000504430 IGHA2P01877 340 aa6.84□□□□□ -1.31
NIPBL-204ENST00000504430 DAB2P98082 770 aa6.84□□□□□ -1.31
NIPBL-204ENST00000504430 USP48Q86UV5 1035 aa6.84□□□□□ -1.31
NIPBL-204ENST00000504430 RNPC3Q96LT9 517 aaKnown RBP6.84□□□□□ -1.31
NIPBL-204ENST00000504430 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
NIPBL-204ENST00000504430 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
NIPBL-204ENST00000504430 DDX41Q9UJV9 622 aaKnown RBP6.84□□□□□ -1.31
NIPBL-204ENST00000504430 PRPF40AO75400 957 aaKnown RBP6.84□□□□□ -1.32
NIPBL-204ENST00000504430 WDR75Q8IWA0 830 aaKnown RBP6.84□□□□□ -1.32
NIPBL-204ENST00000504430 FAM221BA6H8Z2 402 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 HSD3B2P26439 372 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 FAM26DQ5JW98 314 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 SLC39A13Q96H72 371 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 NIF3L1Q9GZT8 377 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-204ENST00000504430 EPB41L2O43491 1005 aaKnown RBP6.83□□□□□ -1.32
NIPBL-204ENST00000504430 PDGFRBP09619 1106 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 FXR2P51116 673 aaKnown RBP eCLIP6.83□□□□□ -1.329e-7■■□□□ 12.5
NIPBL-204ENST00000504430 MYBPC2Q14324 1141 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 SYCP2LQ5T4T6 812 aa6.83□□□□□ -1.32
NIPBL-204ENST00000504430 SRPK1Q96SB4 655 aaKnown RBP6.83□□□□□ -1.32
NIPBL-204ENST00000504430 FBXO9Q9UK97 447 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-204ENST00000504430 COLQQ9Y215 455 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-204ENST00000504430 KDM4FA0A1W2PPD8 638 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 DSC3Q14574 896 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 RINLQ6ZS11 566 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 CHMP7Q8WUX9 453 aaPredicted RBP6.82□□□□□ -1.32
NIPBL-204ENST00000504430 CYLDQ9NQC7 956 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 ERBB3P21860 1342 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 PNMA6FA0A0J9YX94 578 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms