RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 LMBRD1Q9NUN5 540 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 PTPRCP08575 1304 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 TBC1D9Q6ZT07 1266 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 TNPO1Q92973 898 aaKnown RBP8.07□□□□□ -1.12
COPB2-204ENST00000504295 KCNA6P17658 529 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 TTC22Q5TAA0 569 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 MORC1Q86VD1 984 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 UTYO14607 1347 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 TNRC6CQ9HCJ0 1690 aaKnown RBP8.06□□□□□ -1.12
COPB2-204ENST00000504295 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.12
COPB2-204ENST00000504295 KLHL40Q2TBA0 621 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 TMEM132EQ6IEE7 984 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 CALD1Q05682 793 aaKnown RBP8.06□□□□□ -1.12
COPB2-204ENST00000504295 TSPYL6Q8N831 410 aa8.06□□□□□ -1.12
COPB2-204ENST00000504295 TSR2Q969E8 191 aaKnown RBP8.06□□□□□ -1.12
COPB2-204ENST00000504295 BCL9LQ86UU0 1499 aa8.05□□□□□ -1.12
COPB2-204ENST00000504295 POLA2Q14181 598 aa8.05□□□□□ -1.12
COPB2-204ENST00000504295 MRE11P49959 708 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 CEP85Q6P2H3 762 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 CERKQ8TCT0 537 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 PANK2Q9BZ23 570 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
COPB2-204ENST00000504295 ARXQ96QS3 562 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 CABP2Q9NPB3 220 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 TTC21BQ7Z4L5 1316 aa8.04□□□□□ -1.12
COPB2-204ENST00000504295 L1TD1Q5T7N2 865 aaKnown RBP8.03□□□□□ -1.12
COPB2-204ENST00000504295 TTC14Q96N46 770 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 TRAK1Q9UPV9 953 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 KIF13BQ9NQT8 1826 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 ADCY9O60503 1353 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 GAS2L2Q8NHY3 880 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 ALDH8A1Q9H2A2 487 aaPredicted RBP8.03□□□□□ -1.12
COPB2-204ENST00000504295 DDX11L8A8MPP1 907 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 MYH1P12882 1939 aa8.03□□□□□ -1.12
COPB2-204ENST00000504295 MAP3K5Q99683 1374 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
COPB2-204ENST00000504295 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
COPB2-204ENST00000504295 GPT2Q8TD30 523 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 FAM53CQ9NYF3 392 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 C1orf167Q5SNV9 1468 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 RFX7Q2KHR2 1363 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 TTC21AQ8NDW8 1320 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 RIPK4P57078 832 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 C8orf58Q8NAV2 365 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 PRAM1Q96QH2 718 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 GRPEL1Q9HAV7 217 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 NUP98P52948 1817 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 MTX1Q13505 466 aa8.02□□□□□ -1.13
COPB2-204ENST00000504295 RBM43Q6ZSC3 357 aaKnown RBP8.02□□□□□ -1.13
COPB2-204ENST00000504295 K7ELQ4 463 aaPredicted RBP8.01□□□□□ -1.13
COPB2-204ENST00000504295 TRAK2O60296 914 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 PTMSP20962 102 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 PROSER2Q86WR7 435 aaPredicted RBP8.01□□□□□ -1.13
COPB2-204ENST00000504295 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 COL16A1Q07092 1604 aaPredicted RBP8.01□□□□□ -1.13
COPB2-204ENST00000504295 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 DIAPH1O60610 1272 aaKnown RBP8.01□□□□□ -1.13
COPB2-204ENST00000504295 BRD1O95696 1058 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 TNS2Q63HR2 1409 aa8.01□□□□□ -1.13
COPB2-204ENST00000504295 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
COPB2-204ENST00000504295 ST3GAL1Q11201 340 aa8□□□□□ -1.13
COPB2-204ENST00000504295 KCND1Q9NSA2 647 aa8□□□□□ -1.13
COPB2-204ENST00000504295 TOM1O60784 492 aa8□□□□□ -1.13
COPB2-204ENST00000504295 BECN1Q14457 450 aa8□□□□□ -1.13
COPB2-204ENST00000504295 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
COPB2-204ENST00000504295 SPTLC3Q9NUV7 552 aa8□□□□□ -1.13
COPB2-204ENST00000504295 PRDM4Q9UKN5 801 aa8□□□□□ -1.13
COPB2-204ENST00000504295 FLT4P35916 1363 aa8□□□□□ -1.13
COPB2-204ENST00000504295 SLIT2O94813 1529 aa8□□□□□ -1.13
COPB2-204ENST00000504295 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
COPB2-204ENST00000504295 NOL7Q9UMY1 257 aaKnown RBP8□□□□□ -1.13
COPB2-204ENST00000504295 ANAPC15P60006 121 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 NUTM2DQ5VT03 806 aaPredicted RBP7.99□□□□□ -1.13
COPB2-204ENST00000504295 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 RBBP6Q7Z6E9 1792 aaKnown RBP7.99□□□□□ -1.13
COPB2-204ENST00000504295 OFD1O75665 1012 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 BAG4O95429 457 aaKnown RBP7.99□□□□□ -1.13
COPB2-204ENST00000504295 EIF4A2Q14240 407 aaKnown RBP7.99□□□□□ -1.13
COPB2-204ENST00000504295 FBXO41Q8TF61 875 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 AMOTL2Q9Y2J4 779 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 CCDC171Q6TFL3 1326 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 CFAP53Q96M91 514 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 TERF2IPQ9NYB0 399 aa7.99□□□□□ -1.13
COPB2-204ENST00000504295 RRP7AQ9Y3A4 280 aaKnown RBP7.99□□□□□ -1.13
COPB2-204ENST00000504295 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 GNAI1P63096 354 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 IL25Q9H293 177 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 PNNQ9H307 717 aaKnown RBP7.98□□□□□ -1.13
COPB2-204ENST00000504295 MED23Q9ULK4 1368 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 NEDD4P46934 1319 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 SKOR2Q2VWA4 1001 aaPredicted RBP7.98□□□□□ -1.13
COPB2-204ENST00000504295 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
COPB2-204ENST00000504295 RPAP2Q8IXW5 612 aaPredicted RBP7.98□□□□□ -1.13
COPB2-204ENST00000504295 C14orf37Q86TY3 774 aa7.97□□□□□ -1.13
COPB2-204ENST00000504295 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
COPB2-204ENST00000504295 MAP3K19Q56UN5 1328 aa7.97□□□□□ -1.13
COPB2-204ENST00000504295 LRRC37AA6NMS7 1700 aa7.97□□□□□ -1.13
COPB2-204ENST00000504295 RABEP1Q15276 862 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms