RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TRIML1Q8N9V2 468 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 NAP1L3Q99457 506 aaPredicted RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.55□□□□□ -1.521e-6■■□□□ 12.3
NEAT1-202ENST00000501122 FSD2A1L4K1 749 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.55□□□□□ -1.523e-8■■□□□ 13.3
NEAT1-202ENST00000501122 GCOM1H8Y6P7 765 aaPredicted RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 MYZAPP0CAP1 466 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC110Q8TBZ0 833 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 CDKL5O76039 1030 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 LACTBP83111 547 aaPredicted RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 CETN3O15182 167 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC174Q6PII3 467 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 MAP3K7CLP57077 242 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 FBF1Q8TES7 1133 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 FAM212AQ96EL1 285 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 SPATS2Q86XZ4 545 aaKnown RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 RASEFQ8IZ41 740 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 ZNF280CQ8ND82 737 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 A0A087WUV0 522 aaPredicted RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 TACO1Q9BSH4 297 aaKnown RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 FOSBP53539 338 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 ANKRD45Q5TZF3 282 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 DONSONQ9NYP3 566 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 PPP1R12CQ9BZL4 782 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 MCM2P49736 904 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 CTCFLQ8NI51 663 aaPredicted RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 CBFA2T2O43439 604 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 KINO60870 393 aaKnown RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 C6orf163Q5TEZ5 329 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 RASIP1Q5U651 963 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 PALMDQ9NP74 551 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 ANKRD24Q8TF21 1146 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 SREK1Q8WXA9 508 aaKnown RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 SFPQP23246 707 aaKnown RBP eCLIP5.54□□□□□ -1.525e-49■□□□□ 11
NEAT1-202ENST00000501122 HNRNPH2P55795 449 aaKnown RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 KIF4BQ2VIQ3 1234 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 SLU7O95391 586 aaKnown RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 HSP90AA5PQ58FG0 334 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 VPS37CA5D8V6 355 aaPredicted RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 BTN2A1Q7KYR7 527 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 RMI1Q9H9A7 625 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 GRIPAP1Q4V328 841 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 ATP11AP98196 1134 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 FAM114A2Q9NRY5 505 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 UBAP1Q9NZ09 502 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 RRP15Q9Y3B9 282 aaKnown RBP5.54□□□□□ -1.52
NEAT1-202ENST00000501122 GUCY2CP25092 1073 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 RAB3IL1Q8TBN0 382 aa5.54□□□□□ -1.52
NEAT1-202ENST00000501122 USP25Q9UHP3 1055 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 TMCO4Q5TGY1 634 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 CLIP2Q9UDT6 1046 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 CDCA8Q53HL2 280 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 FAM76AQ8TAV0 307 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 BASP1P80723 227 aaKnown RBP5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ABCD1P33897 745 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ZEB2O60315 1214 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ZRANB2O95218 330 aaKnown RBP eCLIP5.53□□□□□ -1.523e-14■■□□□ 14.2
NEAT1-202ENST00000501122 CCDC183Q5T5S1 534 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 GBP1P32455 592 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 KLHL23Q8NBE8 558 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ACBD5Q5T8D3 534 aaPredicted RBP5.53□□□□□ -1.52
NEAT1-202ENST00000501122 TSC1Q92574 1164 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 DTNBP1Q96EV8 351 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 IFT74Q96LB3 600 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 HDGFL1Q5TGJ6 251 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 TRIM35Q9UPQ4 493 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ZBTB22O15209 634 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 SDCCAG8Q86SQ7 713 aaPredicted RBP5.53□□□□□ -1.52
NEAT1-202ENST00000501122 SERPINC1P01008 464 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 CDCA7LQ96GN5 454 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 PNISRQ8TF01 805 aaKnown RBP5.53□□□□□ -1.52
NEAT1-202ENST00000501122 RABGAP1Q9Y3P9 1069 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 ANKRD62A6NC57 917 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 HSF2BPO75031 334 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 NLRP5P59047 1200 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 VCX3BQ9H321 246 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 VCX3AQ9NNX9 186 aa5.53□□□□□ -1.52
NEAT1-202ENST00000501122 GSDMDP57764 484 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC171Q6TFL3 1326 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 ABTB1Q969K4 478 aaPredicted RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 CAPN7Q9Y6W3 813 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 TSNAXIP1Q2TAA8 658 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 CGNL1Q0VF96 1302 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 RUFY3Q7L099 469 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 TERF2Q15554 542 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 RPAP2Q8IXW5 612 aaPredicted RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 TNMDQ9H2S6 317 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 NBPF7P0C2Y1 421 aaPredicted RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 SNW1Q13573 536 aaKnown RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 TSC22D3Q99576 134 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 SPECC1L-ADORA2AF8WAN1 911 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 ERO1AQ96HE7 468 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 IMMTQ16891 758 aaKnown RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 STIM2Q9P246 746 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms