RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
SEC61A1-207ENST00000498837 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
SEC61A1-207ENST00000498837 ATG3Q9NT62 314 aa20.33■□□□□ 0.85
SEC61A1-207ENST00000498837 COL5A3P25940 1745 aaPredicted RBP20.32■□□□□ 0.84
SEC61A1-207ENST00000498837 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
SEC61A1-207ENST00000498837 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
SEC61A1-207ENST00000498837 MMP10P09238 476 aa20.3■□□□□ 0.84
SEC61A1-207ENST00000498837 HSPA6P17066 643 aa20.3■□□□□ 0.84
SEC61A1-207ENST00000498837 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
SEC61A1-207ENST00000498837 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
SEC61A1-207ENST00000498837 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
SEC61A1-207ENST00000498837 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
SEC61A1-207ENST00000498837 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
SEC61A1-207ENST00000498837 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
SEC61A1-207ENST00000498837 KDRP35968 1356 aa20.27■□□□□ 0.84
SEC61A1-207ENST00000498837 KIF3CO14782 793 aa20.27■□□□□ 0.84
SEC61A1-207ENST00000498837 TRAPPC3LQ5T215 181 aa20.26■□□□□ 0.83
SEC61A1-207ENST00000498837 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
SEC61A1-207ENST00000498837 A0A0G2JLW4 131 aa20.25■□□□□ 0.83
SEC61A1-207ENST00000498837 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
SEC61A1-207ENST00000498837 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
SEC61A1-207ENST00000498837 ARHGEF1Q92888 912 aaKnown RBP20.24■□□□□ 0.83
SEC61A1-207ENST00000498837 ARFGEF1Q9Y6D6 1849 aa20.24■□□□□ 0.83
SEC61A1-207ENST00000498837 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
SEC61A1-207ENST00000498837 NLGN1Q8N2Q7 840 aa20.23■□□□□ 0.83
SEC61A1-207ENST00000498837 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
SEC61A1-207ENST00000498837 TGFB2P61812 414 aa20.22■□□□□ 0.83
SEC61A1-207ENST00000498837 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
SEC61A1-207ENST00000498837 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
SEC61A1-207ENST00000498837 C10orf71Q711Q0 1435 aa20.21■□□□□ 0.83
SEC61A1-207ENST00000498837 GYS1P13807 737 aa20.21■□□□□ 0.83
SEC61A1-207ENST00000498837 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
SEC61A1-207ENST00000498837 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
SEC61A1-207ENST00000498837 DCAF5Q96JK2 942 aa20.2■□□□□ 0.82
SEC61A1-207ENST00000498837 SCN11AQ9UI33 1791 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 RPS6KA4O75676 772 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 DPEP1P16444 411 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 ADRA2BP18089 450 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 ZNF530Q6P9A1 599 aaPredicted RBP20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 ARHGAP27Q6ZUM4 889 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 SBF1O95248 1867 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
SEC61A1-207ENST00000498837 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
SEC61A1-207ENST00000498837 RFC4P35249 363 aa20.18■□□□□ 0.82
SEC61A1-207ENST00000498837 CCDC87Q9NVE4 849 aa20.18■□□□□ 0.82
SEC61A1-207ENST00000498837 TJP1Q07157 1748 aa20.18■□□□□ 0.82
SEC61A1-207ENST00000498837 CABP4P57796 275 aa20.17■□□□□ 0.82
SEC61A1-207ENST00000498837 PARP3Q9Y6F1 533 aa20.17■□□□□ 0.82
SEC61A1-207ENST00000498837 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
SEC61A1-207ENST00000498837 FCHSD2O94868 740 aa20.16■□□□□ 0.82
SEC61A1-207ENST00000498837 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
SEC61A1-207ENST00000498837 KCNA3P22001 575 aa20.15■□□□□ 0.82
SEC61A1-207ENST00000498837 AEBP1Q8IUX7 1158 aa20.15■□□□□ 0.82
SEC61A1-207ENST00000498837 PANK3Q9H999 370 aa20.15■□□□□ 0.82
SEC61A1-207ENST00000498837 MTHFSP49914 203 aa20.14■□□□□ 0.81
SEC61A1-207ENST00000498837 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
SEC61A1-207ENST00000498837 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
SEC61A1-207ENST00000498837 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
SEC61A1-207ENST00000498837 SRP68Q9UHB9 627 aaKnown RBP20.14■□□□□ 0.81
SEC61A1-207ENST00000498837 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
SEC61A1-207ENST00000498837 TOMM70O94826 608 aa20.13■□□□□ 0.81
SEC61A1-207ENST00000498837 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
SEC61A1-207ENST00000498837 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
SEC61A1-207ENST00000498837 CCDC88AQ3V6T2 1871 aa20.12■□□□□ 0.81
SEC61A1-207ENST00000498837 APLP1P51693 650 aa20.12■□□□□ 0.81
SEC61A1-207ENST00000498837 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
SEC61A1-207ENST00000498837 FKBP8Q14318 412 aa20.11■□□□□ 0.81
SEC61A1-207ENST00000498837 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
SEC61A1-207ENST00000498837 DDR1Q08345 913 aa20.1■□□□□ 0.81
SEC61A1-207ENST00000498837 C9orf131Q5VYM1 1079 aa20.1■□□□□ 0.81
SEC61A1-207ENST00000498837 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
SEC61A1-207ENST00000498837 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
SEC61A1-207ENST00000498837 USP42Q9H9J4 1324 aaKnown RBP20.09■□□□□ 0.81
SEC61A1-207ENST00000498837 HSPA5P11021 654 aaKnown RBP20.09■□□□□ 0.81
SEC61A1-207ENST00000498837 SULT6B1Q6IMI4 303 aa20.09■□□□□ 0.81
SEC61A1-207ENST00000498837 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
SEC61A1-207ENST00000498837 EIF4G2P78344 907 aaKnown RBP eCLIP20.07■□□□□ 0.8
SEC61A1-207ENST00000498837 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
SEC61A1-207ENST00000498837 CHRNA5P30532 468 aa20.06■□□□□ 0.8
SEC61A1-207ENST00000498837 DALRD3Q5D0E6 543 aaKnown RBP20.06■□□□□ 0.8
SEC61A1-207ENST00000498837 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
SEC61A1-207ENST00000498837 TM4SF1P30408 202 aa20.05■□□□□ 0.8
SEC61A1-207ENST00000498837 IL13P35225 146 aa20.05■□□□□ 0.8
SEC61A1-207ENST00000498837 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 DNAJC10Q8IXB1 793 aa20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 RBM46Q8TBY0 533 aaKnown RBP20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
SEC61A1-207ENST00000498837 DLEC1Q9Y238 1755 aa20.03■□□□□ 0.8
SEC61A1-207ENST00000498837 HTRA3P83110 453 aa20.03■□□□□ 0.8
SEC61A1-207ENST00000498837 LGR6Q9HBX8 967 aa20.03■□□□□ 0.8
SEC61A1-207ENST00000498837 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
SEC61A1-207ENST00000498837 NRXN2Q9P2S2 1712 aa20.02■□□□□ 0.8
SEC61A1-207ENST00000498837 USPL1Q5W0Q7 1092 aa20.02■□□□□ 0.8
SEC61A1-207ENST00000498837 C16orf71Q8IYS4 520 aaPredicted RBP20.02■□□□□ 0.8
SEC61A1-207ENST00000498837 ZPR1O75312 459 aa20.01■□□□□ 0.79
SEC61A1-207ENST00000498837 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms