RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 PANK1Q8TE04 598 aa9.09□□□□□ -0.95
GPATCH4-209ENST00000498641 CLUAP1Q96AJ1 413 aa9.09□□□□□ -0.95
GPATCH4-209ENST00000498641 CCDC136Q96JN2 1154 aa9.09□□□□□ -0.95
GPATCH4-209ENST00000498641 SLC52A2Q9HAB3 445 aa9.09□□□□□ -0.95
GPATCH4-209ENST00000498641 EXOC5O00471 708 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 B4GALNT3Q6L9W6 998 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 ATF7IPQ6VMQ6 1270 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 UNC5CLQ8IV45 518 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 STK31Q9BXU1 1019 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 CHMP4AQ9BY43 222 aa9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 THRAP3Q9Y2W1 955 aaKnown RBP9.08□□□□□ -0.96
GPATCH4-209ENST00000498641 SOS1Q07889 1333 aaPredicted RBP9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 SPATA31A1Q5TZJ5 1347 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 KCNQ3O43525 872 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 CCDC30Q5VVM6 783 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 COG6Q9Y2V7 657 aa9.07□□□□□ -0.96
GPATCH4-209ENST00000498641 SPATA31A5Q5VU36 1347 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 SPATA31A7Q8IWB4 1347 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 KDM6AO15550 1401 aaPredicted RBP9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 ERVV-2B6SEH9 535 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 TRIM27P14373 513 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 EIF2S2P20042 333 aaKnown RBP9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 PELP1Q8IZL8 1130 aaKnown RBP9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 TTC5Q8N0Z6 440 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 API5Q9BZZ5 524 aaKnown RBP9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 USP21Q9UK80 565 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
GPATCH4-209ENST00000498641 HOXB7P09629 217 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 RLBP1P12271 317 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 SLC39A6Q13433 755 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 VPS72Q15906 364 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 DDB1Q16531 1140 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 SLIT2O94813 1529 aa9.05□□□□□ -0.96
GPATCH4-209ENST00000498641 MVPQ14764 893 aaKnown RBP9.04□□□□□ -0.96
GPATCH4-209ENST00000498641 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
GPATCH4-209ENST00000498641 TMOD3Q9NYL9 352 aa9.04□□□□□ -0.96
GPATCH4-209ENST00000498641 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
GPATCH4-209ENST00000498641 PTPRCP08575 1304 aa9.04□□□□□ -0.96
GPATCH4-209ENST00000498641 A0A0G2JS52 829 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 MYT1Q01538 1121 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 AAMPQ13685 434 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 DDX19BQ9UMR2 479 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 PLCH1Q4KWH8 1693 aa9.03□□□□□ -0.96
GPATCH4-209ENST00000498641 PKD1L3Q7Z443 1732 aa9.02□□□□□ -0.96
GPATCH4-209ENST00000498641 LRP6O75581 1613 aa9.02□□□□□ -0.96
GPATCH4-209ENST00000498641 SNRPA1P09661 255 aaKnown RBP9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 CHMP4BQ9H444 224 aaKnown RBP9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 AFF2P51816 1311 aa9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.97
GPATCH4-209ENST00000498641 FLIIQ13045 1269 aa9.01□□□□□ -0.97
GPATCH4-209ENST00000498641 FKBP5Q13451 457 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-209ENST00000498641 G2E3Q7L622 706 aa9.01□□□□□ -0.97
GPATCH4-209ENST00000498641 CHPF2Q9P2E5 772 aa9.01□□□□□ -0.97
GPATCH4-209ENST00000498641 DBF4Q9UBU7 674 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-209ENST00000498641 ADAMTS7Q9UKP4 1686 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 TNS2Q63HR2 1409 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 PRAMEF22A3QJZ6 481 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 PTCD1O75127 700 aaKnown RBP9□□□□□ -0.97
GPATCH4-209ENST00000498641 SLC4A10Q6U841 1118 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 PIGBQ92521 554 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 MRC1P22897 1456 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 ABCC4O15439 1325 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 NRAPQ86VF7 1730 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 NWD2Q9ULI1 1742 aa9□□□□□ -0.97
GPATCH4-209ENST00000498641 HEG1Q9ULI3 1381 aa8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 INTS3Q68E01 1043 aaKnown RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 MARCH10Q8NA82 808 aaPredicted RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 GJD4Q96KN9 370 aaPredicted RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 HYPKQ9NX55 129 aa8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
GPATCH4-209ENST00000498641 F6X3S4 739 aa8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 ANXA1P04083 346 aa8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 CCT4P50991 539 aaKnown RBP8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 RBM42Q9BTD8 480 aaKnown RBP8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 RWDD1Q9H446 243 aaPredicted RBP8.98□□□□□ -0.97
GPATCH4-209ENST00000498641 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms