RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	LINC00116	Q8NCU8	138 aa		19.72	■□□□□ 0.75
IVD-209	ENST00000497816	ARX	Q96QS3	562 aa		19.72	■□□□□ 0.75
IVD-209	ENST00000497816	FHDC1	Q9C0D6	1143 aa	Predicted RBP	19.72	■□□□□ 0.75
IVD-209	ENST00000497816	CIC	Q96RK0	1608 aa	Predicted RBP	19.72	■□□□□ 0.75
IVD-209	ENST00000497816	ITPK1	Q13572	414 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	MRC1	P22897	1456 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	MAP3K5	Q99683	1374 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	CABP4	P57796	275 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	AKAP4	Q5JQC9	854 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	AMIGO3	Q86WK7	504 aa		19.71	■□□□□ 0.75
IVD-209	ENST00000497816	MYH14	Q7Z406	1995 aa	Known RBP	19.7	■□□□□ 0.74
IVD-209	ENST00000497816	AK7	Q96M32	723 aa		19.7	■□□□□ 0.74
IVD-209	ENST00000497816	SYT17	Q9BSW7	474 aa		19.7	■□□□□ 0.74
IVD-209	ENST00000497816	TJP1	Q07157	1748 aa		19.69	■□□□□ 0.74
IVD-209	ENST00000497816	MSH5	O43196	834 aa		19.69	■□□□□ 0.74
IVD-209	ENST00000497816	ATP6V1A	P38606	617 aa		19.69	■□□□□ 0.74
IVD-209	ENST00000497816	FLAD1	Q8NFF5	587 aa		19.69	■□□□□ 0.74
IVD-209	ENST00000497816	SLC4A9	Q96Q91	983 aa		19.69	■□□□□ 0.74
IVD-209	ENST00000497816	POLD1	P28340	1107 aa		19.68	■□□□□ 0.74
IVD-209	ENST00000497816	PPP2R1A	P30153	589 aa		19.67	■□□□□ 0.74
IVD-209	ENST00000497816	MTHFSD	Q2M296	383 aa	Known RBP	19.67	■□□□□ 0.74
IVD-209	ENST00000497816	NFATC2IP	Q8NCF5	419 aa		19.67	■□□□□ 0.74
IVD-209	ENST00000497816	SIPA1L3	O60292	1781 aa	Predicted RBP	19.67	■□□□□ 0.74
IVD-209	ENST00000497816	U2SURP	O15042	1029 aa	Known RBP	19.66	■□□□□ 0.74
IVD-209	ENST00000497816	SSFA2	P28290	1259 aa		19.66	■□□□□ 0.74
IVD-209	ENST00000497816	SMIM5	Q71RC9	77 aa		19.66	■□□□□ 0.74
IVD-209	ENST00000497816	RBM42	Q9BTD8	480 aa	Known RBP	19.66	■□□□□ 0.74
IVD-209	ENST00000497816	LGR6	Q9HBX8	967 aa		19.66	■□□□□ 0.74
IVD-209	ENST00000497816	C4A	P0C0L4	1744 aa		19.65	■□□□□ 0.74
IVD-209	ENST00000497816	UBR2	Q8IWV8	1755 aa		19.65	■□□□□ 0.74
IVD-209	ENST00000497816	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	19.65	■□□□□ 0.74
IVD-209	ENST00000497816	MSL1	Q68DK7	614 aa		19.65	■□□□□ 0.74
IVD-209	ENST00000497816	CFAP53	Q96M91	514 aa		19.65	■□□□□ 0.74
IVD-209	ENST00000497816	RNMT	O43148	476 aa	Known RBP	19.64	■□□□□ 0.73
IVD-209	ENST00000497816	PHF14	O94880	888 aa		19.64	■□□□□ 0.73
IVD-209	ENST00000497816	SLC52A2	Q9HAB3	445 aa		19.64	■□□□□ 0.73
IVD-209	ENST00000497816	GNPAT	O15228	680 aa		19.63	■□□□□ 0.73
IVD-209	ENST00000497816	CHD4	Q14839	1912 aa		19.62	■□□□□ 0.73
IVD-209	ENST00000497816	DCAF8L1	A6NGE4	600 aa		19.61	■□□□□ 0.73
IVD-209	ENST00000497816	PTCD1	O75127	700 aa	Known RBP	19.61	■□□□□ 0.73
IVD-209	ENST00000497816	CNTNAP4	Q9C0A0	1308 aa		19.61	■□□□□ 0.73
IVD-209	ENST00000497816	KCP	Q6ZWJ8	1503 aa		19.61	■□□□□ 0.73
IVD-209	ENST00000497816	RC3H1	Q5TC82	1133 aa	Known RBP	19.61	■□□□□ 0.73
IVD-209	ENST00000497816	RSPH6A	Q9H0K4	717 aa		19.61	■□□□□ 0.73
IVD-209	ENST00000497816	UTRN	P46939	3433 aa		19.6	■□□□□ 0.73
IVD-209	ENST00000497816	KLHL34	Q8N239	644 aa		19.59	■□□□□ 0.73
IVD-209	ENST00000497816	GAS2L2	Q8NHY3	880 aa		19.59	■□□□□ 0.73
IVD-209	ENST00000497816	NUDC	Q9Y266	331 aa		19.59	■□□□□ 0.73
IVD-209	ENST00000497816	PRKAR2B	P31323	418 aa		19.58	■□□□□ 0.73
IVD-209	ENST00000497816	PHACTR3	Q96KR7	559 aa		19.57	■□□□□ 0.72
IVD-209	ENST00000497816	RTCB	Q9Y3I0	505 aa	Known RBP	19.57	■□□□□ 0.72
IVD-209	ENST00000497816	DLG5	Q8TDM6	1919 aa		19.57	■□□□□ 0.72
IVD-209	ENST00000497816	SLC39A6	Q13433	755 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	NLGN2	Q8NFZ4	835 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	GOLGB1	Q14789	3259 aa	Known RBP	19.56	■□□□□ 0.72
IVD-209	ENST00000497816	KIF13B	Q9NQT8	1826 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	GNAT3	A8MTJ3	354 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	RPS6KA4	O75676	772 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	U2AF1L5	P0DN76	240 aa	Predicted RBP	19.56	■□□□□ 0.72
IVD-209	ENST00000497816	U2AF1	Q01081	240 aa	Known RBP eCLIP	19.56	■□□□□ 0.72
IVD-209	ENST00000497816	IL17RE	Q8NFR9	667 aa		19.56	■□□□□ 0.72
IVD-209	ENST00000497816	ADRA2B	P18089	450 aa		19.55	■□□□□ 0.72
IVD-209	ENST00000497816	CRKL	P46109	303 aa	Known RBP	19.55	■□□□□ 0.72
IVD-209	ENST00000497816	TRAPPC3L	Q5T215	181 aa		19.55	■□□□□ 0.72
IVD-209	ENST00000497816	CEMIP	Q8WUJ3	1361 aa		19.54	■□□□□ 0.72
IVD-209	ENST00000497816	FCHSD2	O94868	740 aa		19.53	■□□□□ 0.72
IVD-209	ENST00000497816	DNAJC10	Q8IXB1	793 aa		19.53	■□□□□ 0.72
IVD-209	ENST00000497816	ARHGEF1	Q92888	912 aa	Known RBP	19.53	■□□□□ 0.72
IVD-209	ENST00000497816	YY1	P25490	414 aa		19.52	■□□□□ 0.72
IVD-209	ENST00000497816	CD2AP	Q9Y5K6	639 aa		19.52	■□□□□ 0.72
IVD-209	ENST00000497816	KIAA1551	Q9HCM1	1747 aa		19.52	■□□□□ 0.71
IVD-209	ENST00000497816	INTS5	Q6P9B9	1019 aa	Known RBP	19.51	■□□□□ 0.71
IVD-209	ENST00000497816	TEF	Q10587	303 aa		19.51	■□□□□ 0.71
IVD-209	ENST00000497816	RFC4	P35249	363 aa		19.5	■□□□□ 0.71
IVD-209	ENST00000497816	DDX10	Q13206	875 aa	Known RBP	19.5	■□□□□ 0.71
IVD-209	ENST00000497816	VSIG10	Q8N0Z9	540 aa		19.5	■□□□□ 0.71
IVD-209	ENST00000497816	MMP10	P09238	476 aa		19.49	■□□□□ 0.71
IVD-209	ENST00000497816	CYP19A1	P11511	503 aa	Predicted RBP	19.49	■□□□□ 0.71
IVD-209	ENST00000497816	GYS1	P13807	737 aa		19.49	■□□□□ 0.71
IVD-209	ENST00000497816	GPR162	Q16538	588 aa		19.49	■□□□□ 0.71
IVD-209	ENST00000497816	CCDC87	Q9NVE4	849 aa		19.49	■□□□□ 0.71
IVD-209	ENST00000497816	NLGN1	Q8N2Q7	840 aa		19.48	■□□□□ 0.71
IVD-209	ENST00000497816	N4BP2	Q86UW6	1770 aa	Predicted RBP	19.48	■□□□□ 0.71
IVD-209	ENST00000497816	RALBP1	Q15311	655 aa		19.47	■□□□□ 0.71
IVD-209	ENST00000497816	ZNF790	Q6PG37	636 aa		19.47	■□□□□ 0.71
IVD-209	ENST00000497816	TTC5	Q8N0Z6	440 aa		19.47	■□□□□ 0.71
IVD-209	ENST00000497816	SOS1	Q07889	1333 aa	Predicted RBP	19.47	■□□□□ 0.71
IVD-209	ENST00000497816	USP42	Q9H9J4	1324 aa	Known RBP	19.47	■□□□□ 0.71
IVD-209	ENST00000497816	ZNF496	Q96IT1	587 aa	Predicted RBP	19.46	■□□□□ 0.71
IVD-209	ENST00000497816	HEG1	Q9ULI3	1381 aa		19.46	■□□□□ 0.71
IVD-209	ENST00000497816	YBX3	P16989	372 aa	Known RBP eCLIP	19.46	■□□□□ 0.71
IVD-209	ENST00000497816	SRP68	Q9UHB9	627 aa	Known RBP	19.46	■□□□□ 0.71
IVD-209	ENST00000497816	BRCA1	P38398	1863 aa	Known RBP	19.45	■□□□□ 0.7
IVD-209	ENST00000497816	PELP1	Q8IZL8	1130 aa	Known RBP	19.45	■□□□□ 0.7
IVD-209	ENST00000497816	ZBTB1	Q9Y2K1	713 aa		19.45	■□□□□ 0.7
IVD-209	ENST00000497816	AFDN	P55196	1824 aa	Known RBP	19.44	■□□□□ 0.7
IVD-209	ENST00000497816	MCM10	Q7L590	875 aa		19.44	■□□□□ 0.7
IVD-209	ENST00000497816	PLEKHF1	Q96S99	279 aa		19.44	■□□□□ 0.7
IVD-209	ENST00000497816	C10orf71	Q711Q0	1435 aa		19.43	■□□□□ 0.7
IVD-209	ENST00000497816	HTATSF1	O43719	755 aa	Known RBP	19.43	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms