RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 WDR44Q5JSH3 913 aa7.16□□□□□ -1.26
PSPC1-205ENST00000497722 ALYREFQ86V81 257 aaKnown RBP7.16□□□□□ -1.26
PSPC1-205ENST00000497722 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
PSPC1-205ENST00000497722 ESYT1Q9BSJ8 1104 aa7.16□□□□□ -1.26
PSPC1-205ENST00000497722 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
PSPC1-205ENST00000497722 FURINP09958 794 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 SOX11P35716 441 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 POU4F2Q12837 409 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 SLFNL1Q499Z3 407 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
PSPC1-205ENST00000497722 RNF135Q8IUD6 432 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 CNKSR1Q969H4 720 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 NLRP3Q96P20 1036 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 ALG2Q9H553 416 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 LRRC4BQ9NT99 713 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 DYRK1BQ9Y463 629 aa7.15□□□□□ -1.26
PSPC1-205ENST00000497722 MYCP01106 439 aaPredicted RBP7.14□□□□□ -1.27
PSPC1-205ENST00000497722 CENPCQ03188 943 aa7.14□□□□□ -1.27
PSPC1-205ENST00000497722 USP4Q13107 963 aa7.14□□□□□ -1.27
PSPC1-205ENST00000497722 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
PSPC1-205ENST00000497722 IGF1RP08069 1367 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
PSPC1-205ENST00000497722 DBN1Q16643 649 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 MAP7D1Q3KQU3 841 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 FOXR1Q6PIV2 292 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
PSPC1-205ENST00000497722 GMCL1Q96IK5 515 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 ETNK1Q9HBU6 452 aa7.13□□□□□ -1.27
PSPC1-205ENST00000497722 SCNN1DP51172 638 aa7.12□□□□□ -1.27
PSPC1-205ENST00000497722 SLC27A3Q5K4L6 730 aa7.12□□□□□ -1.27
PSPC1-205ENST00000497722 PLPP7Q8NBV4 271 aa7.12□□□□□ -1.27
PSPC1-205ENST00000497722 KRBA1A5PL33 1030 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 PIK3CDO00329 1044 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 WASLO00401 505 aaPredicted RBP7.11□□□□□ -1.27
PSPC1-205ENST00000497722 THBS1P07996 1170 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 FLIIQ13045 1269 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 TAS1R3Q7RTX0 852 aa7.11□□□□□ -1.27
PSPC1-205ENST00000497722 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
PSPC1-205ENST00000497722 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
PSPC1-205ENST00000497722 ADAMTS19Q8TE59 1207 aa7.1□□□□□ -1.27
PSPC1-205ENST00000497722 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
PSPC1-205ENST00000497722 ESCO1Q5FWF5 840 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 ACDQ96AP0 544 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 ZSCAN10Q96SZ4 725 aaPredicted RBP7.09□□□□□ -1.27
PSPC1-205ENST00000497722 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
PSPC1-205ENST00000497722 F11P03951 625 aa7.08□□□□□ -1.28
PSPC1-205ENST00000497722 INHAP05111 366 aa7.08□□□□□ -1.28
PSPC1-205ENST00000497722 UBAP2LQ14157 1087 aaKnown RBP7.08□□□□□ -1.28
PSPC1-205ENST00000497722 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
PSPC1-205ENST00000497722 PPARGC1BQ86YN6 1023 aaKnown RBP7.08□□□□□ -1.28
PSPC1-205ENST00000497722 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
PSPC1-205ENST00000497722 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
PSPC1-205ENST00000497722 NSFL1CQ9UNZ2 370 aaKnown RBP7.08□□□□□ -1.28
PSPC1-205ENST00000497722 BTBD11A6QL63 1104 aa7.07□□□□□ -1.28
PSPC1-205ENST00000497722 POM121CA8CG34 1229 aa7.07□□□□□ -1.28
PSPC1-205ENST00000497722 TMEM229AB2RXF0 380 aa7.07□□□□□ -1.28
PSPC1-205ENST00000497722 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
PSPC1-205ENST00000497722 KRTAP4-12Q9BQ66 201 aa7.07□□□□□ -1.28
PSPC1-205ENST00000497722 H7C1W4 665 aa7.06□□□□□ -1.28
PSPC1-205ENST00000497722 OIP5O43482 229 aa7.06□□□□□ -1.28
PSPC1-205ENST00000497722 GDF10P55107 478 aa7.06□□□□□ -1.28
PSPC1-205ENST00000497722 RIPOR1Q6ZS17 1223 aa7.06□□□□□ -1.28
PSPC1-205ENST00000497722 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
PSPC1-205ENST00000497722 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
PSPC1-205ENST00000497722 GAS2L1Q99501 681 aaPredicted RBP7.06□□□□□ -1.28
PSPC1-205ENST00000497722 A0A1B0GTH6 734 aa7.05□□□□□ -1.28
PSPC1-205ENST00000497722 GPR25O00155 361 aa7.05□□□□□ -1.28
PSPC1-205ENST00000497722 LZTS3O60299 673 aaPredicted RBP7.05□□□□□ -1.28
PSPC1-205ENST00000497722 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
PSPC1-205ENST00000497722 MTFR1Q15390 333 aa7.05□□□□□ -1.28
PSPC1-205ENST00000497722 RHBDD1Q8TEB9 315 aa7.05□□□□□ -1.28
PSPC1-205ENST00000497722 GTPBP3Q969Y2 492 aaKnown RBP7.05□□□□□ -1.28
PSPC1-205ENST00000497722 RAD21O60216 631 aa7.04□□□□□ -1.28
PSPC1-205ENST00000497722 PHKA2P46019 1235 aa7.04□□□□□ -1.28
PSPC1-205ENST00000497722 SMTNP53814 917 aa7.04□□□□□ -1.28
PSPC1-205ENST00000497722 TLR1Q15399 786 aa7.04□□□□□ -1.28
PSPC1-205ENST00000497722 UCN2Q96RP3 112 aa7.04□□□□□ -1.28
PSPC1-205ENST00000497722 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
PSPC1-205ENST00000497722 SKIP12755 728 aa7.03□□□□□ -1.28
PSPC1-205ENST00000497722 MX2P20592 715 aa7.03□□□□□ -1.28
PSPC1-205ENST00000497722 SNRPNP63162 240 aaKnown RBP7.03□□□□□ -1.28
PSPC1-205ENST00000497722 GNASQ5JWF2 1037 aa7.03□□□□□ -1.28
PSPC1-205ENST00000497722 TMEM214Q6NUQ4 689 aaKnown RBP7.03□□□□□ -1.28
PSPC1-205ENST00000497722 NUCKS1Q9H1E3 243 aaKnown RBP7.03□□□□□ -1.28
PSPC1-205ENST00000497722 COL8A1P27658 744 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 MSX1P28360 303 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 NCOA4Q13772 614 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 LBRQ14739 615 aaKnown RBP7.02□□□□□ -1.29
PSPC1-205ENST00000497722 EML3Q32P44 896 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 WWC1Q8IX03 1113 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 CFHR5Q9BXR6 569 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms