RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
FN1-226ENST00000496542 ITPK1Q13572 414 aa17.63■□□□□ 0.41
FN1-226ENST00000496542 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
FN1-226ENST00000496542 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
FN1-226ENST00000496542 DCAF5Q96JK2 942 aa17.63■□□□□ 0.41
FN1-226ENST00000496542 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
FN1-226ENST00000496542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.62■□□□□ 0.41
FN1-226ENST00000496542 ERVV-2B6SEH9 535 aa17.62■□□□□ 0.41
FN1-226ENST00000496542 GNPATO15228 680 aa17.61■□□□□ 0.41
FN1-226ENST00000496542 IL13P35225 146 aa17.61■□□□□ 0.41
FN1-226ENST00000496542 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
FN1-226ENST00000496542 SSFA2P28290 1259 aa17.6■□□□□ 0.41
FN1-226ENST00000496542 CABP4P57796 275 aa17.6■□□□□ 0.41
FN1-226ENST00000496542 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
FN1-226ENST00000496542 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
FN1-226ENST00000496542 KDRP35968 1356 aa17.6■□□□□ 0.41
FN1-226ENST00000496542 MTHFSP49914 203 aa17.59■□□□□ 0.41
FN1-226ENST00000496542 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
FN1-226ENST00000496542 ZNF784Q8NCA9 323 aaPredicted RBP17.58■□□□□ 0.4
FN1-226ENST00000496542 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
FN1-226ENST00000496542 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
FN1-226ENST00000496542 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
FN1-226ENST00000496542 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
FN1-226ENST00000496542 COL5A3P25940 1745 aaPredicted RBP17.56■□□□□ 0.4
FN1-226ENST00000496542 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
FN1-226ENST00000496542 HMOX1P09601 288 aa17.55■□□□□ 0.4
FN1-226ENST00000496542 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
FN1-226ENST00000496542 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
FN1-226ENST00000496542 NFATC2IPQ8NCF5 419 aa17.54■□□□□ 0.4
FN1-226ENST00000496542 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
FN1-226ENST00000496542 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
FN1-226ENST00000496542 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
FN1-226ENST00000496542 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
FN1-226ENST00000496542 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
FN1-226ENST00000496542 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
FN1-226ENST00000496542 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
FN1-226ENST00000496542 NPC1L1Q9UHC9 1359 aa17.52■□□□□ 0.39
FN1-226ENST00000496542 GRIN3BO60391 1043 aa17.51■□□□□ 0.39
FN1-226ENST00000496542 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
FN1-226ENST00000496542 TJP1Q07157 1748 aa17.5■□□□□ 0.39
FN1-226ENST00000496542 MMP10P09238 476 aa17.5■□□□□ 0.39
FN1-226ENST00000496542 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
FN1-226ENST00000496542 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
FN1-226ENST00000496542 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
FN1-226ENST00000496542 ADRA2BP18089 450 aa17.49■□□□□ 0.39
FN1-226ENST00000496542 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
FN1-226ENST00000496542 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
FN1-226ENST00000496542 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
FN1-226ENST00000496542 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
FN1-226ENST00000496542 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
FN1-226ENST00000496542 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
FN1-226ENST00000496542 MRC1P22897 1456 aa17.48■□□□□ 0.39
FN1-226ENST00000496542 U2SURPO15042 1029 aaKnown RBP17.47■□□□□ 0.39
FN1-226ENST00000496542 RFC4P35249 363 aa17.47■□□□□ 0.39
FN1-226ENST00000496542 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
FN1-226ENST00000496542 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
FN1-226ENST00000496542 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
FN1-226ENST00000496542 GYS1P13807 737 aa17.45■□□□□ 0.38
FN1-226ENST00000496542 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
FN1-226ENST00000496542 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
FN1-226ENST00000496542 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
FN1-226ENST00000496542 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
FN1-226ENST00000496542 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
FN1-226ENST00000496542 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
FN1-226ENST00000496542 PXDNLA1KZ92 1463 aa17.43■□□□□ 0.38
FN1-226ENST00000496542 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
FN1-226ENST00000496542 KIAA1551Q9HCM1 1747 aa17.42■□□□□ 0.38
FN1-226ENST00000496542 C10orf71Q711Q0 1435 aa17.42■□□□□ 0.38
FN1-226ENST00000496542 PARP3Q9Y6F1 533 aa17.42■□□□□ 0.38
FN1-226ENST00000496542 INTS5Q6P9B9 1019 aaKnown RBP17.41■□□□□ 0.38
FN1-226ENST00000496542 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
FN1-226ENST00000496542 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
FN1-226ENST00000496542 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
FN1-226ENST00000496542 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
FN1-226ENST00000496542 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
FN1-226ENST00000496542 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
FN1-226ENST00000496542 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
FN1-226ENST00000496542 FKBP8Q14318 412 aa17.39■□□□□ 0.37
FN1-226ENST00000496542 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
FN1-226ENST00000496542 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
FN1-226ENST00000496542 CYP19A1P11511 503 aaPredicted RBP17.38■□□□□ 0.37
FN1-226ENST00000496542 C1QTNF8P60827 252 aa17.38■□□□□ 0.37
FN1-226ENST00000496542 TGFB2P61812 414 aa17.38■□□□□ 0.37
FN1-226ENST00000496542 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
FN1-226ENST00000496542 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
FN1-226ENST00000496542 ZPR1O75312 459 aa17.37■□□□□ 0.37
FN1-226ENST00000496542 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
FN1-226ENST00000496542 TEFQ10587 303 aa17.37■□□□□ 0.37
FN1-226ENST00000496542 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
FN1-226ENST00000496542 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
FN1-226ENST00000496542 DPEP1P16444 411 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 DDR1Q08345 913 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 ADCY9O60503 1353 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 COL15A1P39059 1388 aa17.36■□□□□ 0.37
FN1-226ENST00000496542 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
FN1-226ENST00000496542 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
FN1-226ENST00000496542 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms