RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
RBM39-240ENST00000495293 CECR2Q9BXF3 1484 aa8.22□□□□□ -1.09
RBM39-240ENST00000495293 WDR44Q5JSH3 913 aa8.22□□□□□ -1.09
RBM39-240ENST00000495293 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
RBM39-240ENST00000495293 CHIC2Q9UKJ5 165 aa8.22□□□□□ -1.09
RBM39-240ENST00000495293 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
RBM39-240ENST00000495293 IGHA1P01876 353 aa8.21□□□□□ -1.1
RBM39-240ENST00000495293 F11P03951 625 aa8.21□□□□□ -1.1
RBM39-240ENST00000495293 C4orf17Q53FE4 359 aa8.21□□□□□ -1.1
RBM39-240ENST00000495293 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
RBM39-240ENST00000495293 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
RBM39-240ENST00000495293 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
RBM39-240ENST00000495293 CNTNAP5Q8WYK1 1306 aa8.2□□□□□ -1.1
RBM39-240ENST00000495293 H7C1W4 665 aa8.19□□□□□ -1.1
RBM39-240ENST00000495293 ITGB2P05107 769 aa8.19□□□□□ -1.1
RBM39-240ENST00000495293 SCNN1DP51172 638 aa8.19□□□□□ -1.1
RBM39-240ENST00000495293 MARSP56192 900 aaKnown RBP8.19□□□□□ -1.1
RBM39-240ENST00000495293 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
RBM39-240ENST00000495293 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
RBM39-240ENST00000495293 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
RBM39-240ENST00000495293 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
RBM39-240ENST00000495293 APBB1O00213 710 aa8.18□□□□□ -1.1
RBM39-240ENST00000495293 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
RBM39-240ENST00000495293 RUBCNLQ9H714 662 aa8.18□□□□□ -1.1
RBM39-240ENST00000495293 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
RBM39-240ENST00000495293 BCRP11274 1271 aa8.17□□□□□ -1.1
RBM39-240ENST00000495293 MX2P20592 715 aa8.17□□□□□ -1.1
RBM39-240ENST00000495293 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
RBM39-240ENST00000495293 MAP3K10Q02779 954 aa8.17□□□□□ -1.1
RBM39-240ENST00000495293 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
RBM39-240ENST00000495293 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
RBM39-240ENST00000495293 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
RBM39-240ENST00000495293 ABL2P42684 1182 aa8.16□□□□□ -1.1
RBM39-240ENST00000495293 MCM6Q14566 821 aa8.16□□□□□ -1.1
RBM39-240ENST00000495293 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
RBM39-240ENST00000495293 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
RBM39-240ENST00000495293 ESF1Q9H501 851 aaKnown RBP8.16□□□□□ -1.1
RBM39-240ENST00000495293 BAZ1AQ9NRL2 1556 aaPredicted RBP8.15□□□□□ -1.1
RBM39-240ENST00000495293 A0A1B0GTH6 734 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 MSX1P28360 303 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 SCARF2Q96GP6 870 aaPredicted RBP8.15□□□□□ -1.1
RBM39-240ENST00000495293 TRERF1Q96PN7 1200 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 USP3Q9Y6I4 520 aa8.15□□□□□ -1.1
RBM39-240ENST00000495293 C2CD2LO14523 706 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 SNRPNP63162 240 aaKnown RBP8.14□□□□□ -1.11
RBM39-240ENST00000495293 FOXK2Q01167 660 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 TLR1Q15399 786 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 TMEM214Q6NUQ4 689 aaKnown RBP8.14□□□□□ -1.11
RBM39-240ENST00000495293 KANK3Q6NY19 840 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
RBM39-240ENST00000495293 RHBDD1Q8TEB9 315 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 SMARCA4P51532 1647 aa8.14□□□□□ -1.11
RBM39-240ENST00000495293 OIP5O43482 229 aa8.13□□□□□ -1.11
RBM39-240ENST00000495293 ATP4AP20648 1035 aa8.13□□□□□ -1.11
RBM39-240ENST00000495293 USP4Q13107 963 aa8.13□□□□□ -1.11
RBM39-240ENST00000495293 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
RBM39-240ENST00000495293 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
RBM39-240ENST00000495293 TMEM229AB2RXF0 380 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 BNIP3LO60238 219 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 HOXB4P17483 251 aaPredicted RBP8.12□□□□□ -1.11
RBM39-240ENST00000495293 GDF10P55107 478 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 GNASQ5JWF2 1037 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 CFHR5Q9BXR6 569 aa8.12□□□□□ -1.11
RBM39-240ENST00000495293 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
RBM39-240ENST00000495293 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 INHAP05111 366 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 NEDD1Q8NHV4 660 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 COG6Q9Y2V7 657 aa8.11□□□□□ -1.11
RBM39-240ENST00000495293 CTBSQ01459 385 aa8.1□□□□□ -1.11
RBM39-240ENST00000495293 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
RBM39-240ENST00000495293 POM121Q96HA1 1249 aa8.1□□□□□ -1.11
RBM39-240ENST00000495293 CRISPLD1Q9H336 500 aa8.1□□□□□ -1.11
RBM39-240ENST00000495293 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
RBM39-240ENST00000495293 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
RBM39-240ENST00000495293 NCAPD3P42695 1498 aa8.09□□□□□ -1.11
RBM39-240ENST00000495293 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
RBM39-240ENST00000495293 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
RBM39-240ENST00000495293 ADAM23O75077 832 aa8.08□□□□□ -1.12
RBM39-240ENST00000495293 MAP2K3P46734 347 aa8.08□□□□□ -1.12
RBM39-240ENST00000495293 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
RBM39-240ENST00000495293 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
RBM39-240ENST00000495293 SMTNP53814 917 aa8.07□□□□□ -1.12
RBM39-240ENST00000495293 LBRQ14739 615 aaKnown RBP8.07□□□□□ -1.12
RBM39-240ENST00000495293 GALNT6Q8NCL4 622 aa8.07□□□□□ -1.12
RBM39-240ENST00000495293 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
RBM39-240ENST00000495293 ATXN7L1Q9ULK2 861 aaPredicted RBP8.07□□□□□ -1.12
RBM39-240ENST00000495293 MROH2BQ7Z745 1585 aa8.06□□□□□ -1.12
RBM39-240ENST00000495293 PROCP04070 461 aa8.06□□□□□ -1.12
RBM39-240ENST00000495293 FGFR3P22607 806 aa8.06□□□□□ -1.12
RBM39-240ENST00000495293 COL8A1P27658 744 aa8.06□□□□□ -1.12
RBM39-240ENST00000495293 WASHC4Q2M389 1173 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms