RNA–Protein interactions for RNA: ENST00000494873.1

RNF11-203, Transcript of ring finger protein 11, humanhuman

TSL 3

Gene RNF11, Length 953 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-203ENST00000494873 LINC00116Q8NCU8 138 aa31.16■■■□□ 2.58
RNF11-203ENST00000494873 KDM6AO15550 1401 aaPredicted RBP31.15■■■□□ 2.58
RNF11-203ENST00000494873 NPC1L1Q9UHC9 1359 aa31.15■■■□□ 2.58
RNF11-203ENST00000494873 CABP4P57796 275 aa31.14■■■□□ 2.58
RNF11-203ENST00000494873 ITPK1Q13572 414 aa31.14■■■□□ 2.58
RNF11-203ENST00000494873 PHF14O94880 888 aa31.13■■■□□ 2.57
RNF11-203ENST00000494873 SSFA2P28290 1259 aa31.13■■■□□ 2.57
RNF11-203ENST00000494873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.12■■■□□ 2.57
RNF11-203ENST00000494873 AMIGO3Q86WK7 504 aa31.11■■■□□ 2.57
RNF11-203ENST00000494873 UBR3Q6ZT12 1888 aa31.1■■■□□ 2.57
RNF11-203ENST00000494873 GNPATO15228 680 aa31.09■■■□□ 2.57
RNF11-203ENST00000494873 GPR162Q16538 588 aa31.09■■■□□ 2.57
RNF11-203ENST00000494873 DIAPH1O60610 1272 aaKnown RBP31.08■■■□□ 2.57
RNF11-203ENST00000494873 RBM42Q9BTD8 480 aaKnown RBP31.08■■■□□ 2.57
RNF11-203ENST00000494873 NLGN2Q8NFZ4 835 aa31.07■■■□□ 2.56
RNF11-203ENST00000494873 SMIM5Q71RC9 77 aa31.06■■■□□ 2.56
RNF11-203ENST00000494873 ZNF831Q5JPB2 1677 aa31.06■■■□□ 2.56
RNF11-203ENST00000494873 HMOX1P09601 288 aa31.05■■■□□ 2.56
RNF11-203ENST00000494873 AKAP4Q5JQC9 854 aa31.05■■■□□ 2.56
RNF11-203ENST00000494873 SLC4A9Q96Q91 983 aa31.04■■■□□ 2.56
RNF11-203ENST00000494873 CNGB1Q14028 1251 aaPredicted RBP31.03■■■□□ 2.56
RNF11-203ENST00000494873 PELP1Q8IZL8 1130 aaKnown RBP31.03■■■□□ 2.56
RNF11-203ENST00000494873 NFATC2IPQ8NCF5 419 aa31.03■■■□□ 2.56
RNF11-203ENST00000494873 CD2APQ9Y5K6 639 aa31.02■■■□□ 2.56
RNF11-203ENST00000494873 RTCBQ9Y3I0 505 aaKnown RBP31.01■■■□□ 2.55
RNF11-203ENST00000494873 RC3H1Q5TC82 1133 aaKnown RBP31■■■□□ 2.55
RNF11-203ENST00000494873 CNTNAP4Q9C0A0 1308 aa30.99■■■□□ 2.55
RNF11-203ENST00000494873 COL3A1P02461 1466 aaPredicted RBP30.98■■■□□ 2.55
RNF11-203ENST00000494873 PTCD1O75127 700 aaKnown RBP30.98■■■□□ 2.55
RNF11-203ENST00000494873 SCN11AQ9UI33 1791 aa30.97■■■□□ 2.55
RNF11-203ENST00000494873 ADRA2BP18089 450 aa30.96■■■□□ 2.55
RNF11-203ENST00000494873 TRAPPC3LQ5T215 181 aa30.96■■■□□ 2.55
RNF11-203ENST00000494873 SLC52A2Q9HAB3 445 aa30.96■■■□□ 2.55
RNF11-203ENST00000494873 COL5A3P25940 1745 aaPredicted RBP30.95■■■□□ 2.55
RNF11-203ENST00000494873 U2SURPO15042 1029 aaKnown RBP30.94■■■□□ 2.54
RNF11-203ENST00000494873 RNMTO43148 476 aaKnown RBP30.94■■■□□ 2.54
RNF11-203ENST00000494873 RPS6KA4O75676 772 aa30.94■■■□□ 2.54
RNF11-203ENST00000494873 MTHFSDQ2M296 383 aaKnown RBP30.94■■■□□ 2.54
RNF11-203ENST00000494873 CHD4Q14839 1912 aa30.93■■■□□ 2.54
RNF11-203ENST00000494873 LGR6Q9HBX8 967 aa30.93■■■□□ 2.54
RNF11-203ENST00000494873 MRC1P22897 1456 aa30.93■■■□□ 2.54
RNF11-203ENST00000494873 GRIN3BO60391 1043 aa30.92■■■□□ 2.54
RNF11-203ENST00000494873 ZNF784Q8NCA9 323 aaPredicted RBP30.91■■■□□ 2.54
RNF11-203ENST00000494873 CFAP53Q96M91 514 aa30.91■■■□□ 2.54
RNF11-203ENST00000494873 YBX3P16989 372 aaKnown RBP eCLIP30.9■■■□□ 2.54
RNF11-203ENST00000494873 ARHGEF1Q92888 912 aaKnown RBP30.9■■■□□ 2.54
RNF11-203ENST00000494873 CICQ96RK0 1608 aaPredicted RBP30.89■■■□□ 2.54
RNF11-203ENST00000494873 RFC4P35249 363 aa30.89■■■□□ 2.54
RNF11-203ENST00000494873 CRKLP46109 303 aaKnown RBP30.89■■■□□ 2.54
RNF11-203ENST00000494873 NLGN1Q8N2Q7 840 aa30.89■■■□□ 2.54
RNF11-203ENST00000494873 MMP10P09238 476 aa30.88■■■□□ 2.53
RNF11-203ENST00000494873 ADAMTS7Q9UKP4 1686 aa30.87■■■□□ 2.53
RNF11-203ENST00000494873 TJP1Q07157 1748 aa30.86■■■□□ 2.53
RNF11-203ENST00000494873 GAS2L2Q8NHY3 880 aa30.85■■■□□ 2.53
RNF11-203ENST00000494873 UTRNP46939 3433 aa30.83■■■□□ 2.53
RNF11-203ENST00000494873 GYS1P13807 737 aa30.83■■■□□ 2.53
RNF11-203ENST00000494873 SLC39A6Q13433 755 aa30.82■■■□□ 2.52
RNF11-203ENST00000494873 NUDCQ9Y266 331 aa30.82■■■□□ 2.52
RNF11-203ENST00000494873 MYH14Q7Z406 1995 aaKnown RBP30.82■■■□□ 2.52
RNF11-203ENST00000494873 DNAJC10Q8IXB1 793 aa30.81■■■□□ 2.52
RNF11-203ENST00000494873 GNAT3A8MTJ3 354 aa30.8■■■□□ 2.52
RNF11-203ENST00000494873 PPP2R1AP30153 589 aa30.8■■■□□ 2.52
RNF11-203ENST00000494873 INTS5Q6P9B9 1019 aaKnown RBP30.8■■■□□ 2.52
RNF11-203ENST00000494873 CCDC87Q9NVE4 849 aa30.8■■■□□ 2.52
RNF11-203ENST00000494873 KCPQ6ZWJ8 1503 aa30.79■■■□□ 2.52
RNF11-203ENST00000494873 C4AP0C0L4 1744 aa30.79■■■□□ 2.52
RNF11-203ENST00000494873 VIRMAQ69YN4 1812 aaKnown RBP30.77■■■□□ 2.52
RNF11-203ENST00000494873 PRKAR2BP31323 418 aa30.77■■■□□ 2.52
RNF11-203ENST00000494873 TEFQ10587 303 aa30.77■■■□□ 2.52
RNF11-203ENST00000494873 VSIG10Q8N0Z9 540 aa30.77■■■□□ 2.52
RNF11-203ENST00000494873 PARP3Q9Y6F1 533 aa30.77■■■□□ 2.52
RNF11-203ENST00000494873 USP42Q9H9J4 1324 aaKnown RBP30.76■■■□□ 2.52
RNF11-203ENST00000494873 CYP19A1P11511 503 aaPredicted RBP30.76■■■□□ 2.51
RNF11-203ENST00000494873 TTC5Q8N0Z6 440 aa30.76■■■□□ 2.51
RNF11-203ENST00000494873 RSPH6AQ9H0K4 717 aa30.76■■■□□ 2.51
RNF11-203ENST00000494873 C10orf71Q711Q0 1435 aa30.75■■■□□ 2.51
RNF11-203ENST00000494873 SRP68Q9UHB9 627 aaKnown RBP30.75■■■□□ 2.51
RNF11-203ENST00000494873 IL17REQ8NFR9 667 aa30.74■■■□□ 2.51
RNF11-203ENST00000494873 U2AF1L5P0DN76 240 aaPredicted RBP30.73■■■□□ 2.51
RNF11-203ENST00000494873 TGFB2P61812 414 aa30.73■■■□□ 2.51
RNF11-203ENST00000494873 U2AF1Q01081 240 aaKnown RBP eCLIP30.73■■■□□ 2.51
RNF11-203ENST00000494873 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
RNF11-203ENST00000494873 PXDNLA1KZ92 1463 aa30.72■■■□□ 2.51
RNF11-203ENST00000494873 PHACTR3Q96KR7 559 aa30.72■■■□□ 2.51
RNF11-203ENST00000494873 WWC3Q9ULE0 1092 aa30.72■■■□□ 2.51
RNF11-203ENST00000494873 GOLGB1Q14789 3259 aaKnown RBP30.72■■■□□ 2.51
RNF11-203ENST00000494873 KIF13BQ9NQT8 1826 aa30.71■■■□□ 2.51
RNF11-203ENST00000494873 UBR2Q8IWV8 1755 aa30.71■■■□□ 2.51
RNF11-203ENST00000494873 ZPR1O75312 459 aa30.7■■■□□ 2.51
RNF11-203ENST00000494873 FKBP8Q14318 412 aa30.7■■■□□ 2.51
RNF11-203ENST00000494873 CEMIPQ8WUJ3 1361 aa30.68■■■□□ 2.5
RNF11-203ENST00000494873 FCHSD2O94868 740 aa30.68■■■□□ 2.5
RNF11-203ENST00000494873 ZNF790Q6PG37 636 aa30.68■■■□□ 2.5
RNF11-203ENST00000494873 ZBTB1Q9Y2K1 713 aa30.68■■■□□ 2.5
RNF11-203ENST00000494873 COL15A1P39059 1388 aa30.67■■■□□ 2.5
RNF11-203ENST00000494873 STARD3NLO95772 234 aa30.67■■■□□ 2.5
RNF11-203ENST00000494873 USPL1Q5W0Q7 1092 aa30.66■■■□□ 2.5
RNF11-203ENST00000494873 ZNF496Q96IT1 587 aaPredicted RBP30.66■■■□□ 2.5
RNF11-203ENST00000494873 KIAA1551Q9HCM1 1747 aa30.65■■■□□ 2.5
RNF11-203ENST00000494873 A0A0G2JLW4 131 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms