RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
APTX-230ENST00000494649 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 LRRC4BQ9NT99 713 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 PTCD1O75127 700 aaKnown RBP14.7□□□□□ -0.06
APTX-230ENST00000494649 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 APAF1O14727 1248 aa14.69□□□□□ -0.06
APTX-230ENST00000494649 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 TEFQ10587 303 aa14.69□□□□□ -0.06
APTX-230ENST00000494649 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 CCNL1Q9UK58 526 aaPredicted RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 SALL2Q9Y467 1007 aaPredicted RBP14.69□□□□□ -0.06
APTX-230ENST00000494649 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
APTX-230ENST00000494649 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
APTX-230ENST00000494649 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
APTX-230ENST00000494649 R3HDM1Q15032 1099 aaKnown RBP14.66□□□□□ -0.06
APTX-230ENST00000494649 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
APTX-230ENST00000494649 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 KCNQ3O43525 872 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 SIK1P57059 783 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 RREB1Q92766 1687 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 SLC4A9Q96Q91 983 aa14.65□□□□□ -0.06
APTX-230ENST00000494649 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
APTX-230ENST00000494649 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
APTX-230ENST00000494649 SMARCC1Q92922 1105 aaPredicted RBP14.64□□□□□ -0.07
APTX-230ENST00000494649 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
APTX-230ENST00000494649 MRC1P22897 1456 aa14.64□□□□□ -0.07
APTX-230ENST00000494649 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
APTX-230ENST00000494649 LY75O60449 1722 aa14.63□□□□□ -0.07
APTX-230ENST00000494649 ITPK1Q13572 414 aa14.63□□□□□ -0.07
APTX-230ENST00000494649 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
APTX-230ENST00000494649 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
APTX-230ENST00000494649 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
APTX-230ENST00000494649 PDGFDQ9GZP0 370 aaPredicted RBP14.62□□□□□ -0.07
APTX-230ENST00000494649 RGPD3A6NKT7 1758 aaPredicted RBP14.62□□□□□ -0.07
APTX-230ENST00000494649 RGPD4Q7Z3J3 1758 aa14.62□□□□□ -0.07
APTX-230ENST00000494649 SLC27A3Q5K4L6 730 aa14.62□□□□□ -0.07
APTX-230ENST00000494649 NBPF14Q5TI25 921 aa14.62□□□□□ -0.07
APTX-230ENST00000494649 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
APTX-230ENST00000494649 ZNF790Q6PG37 636 aa14.61□□□□□ -0.07
APTX-230ENST00000494649 LINC00116Q8NCU8 138 aa14.61□□□□□ -0.07
APTX-230ENST00000494649 CCER2I3L3R5 266 aa14.61□□□□□ -0.07
APTX-230ENST00000494649 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
APTX-230ENST00000494649 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
APTX-230ENST00000494649 STK32BQ9NY57 414 aa14.6□□□□□ -0.07
APTX-230ENST00000494649 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
APTX-230ENST00000494649 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 PHF14O94880 888 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 SLC15A2Q16348 729 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 DNAJC10Q8IXB1 793 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
APTX-230ENST00000494649 KCPQ6ZWJ8 1503 aa14.58□□□□□ -0.07
APTX-230ENST00000494649 C5P01031 1676 aa14.58□□□□□ -0.07
APTX-230ENST00000494649 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
APTX-230ENST00000494649 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
APTX-230ENST00000494649 TSPYL4Q9UJ04 414 aa14.57□□□□□ -0.08
APTX-230ENST00000494649 MSH5O43196 834 aa14.57□□□□□ -0.08
APTX-230ENST00000494649 AK7Q96M32 723 aa14.57□□□□□ -0.08
APTX-230ENST00000494649 GNPATO15228 680 aa14.56□□□□□ -0.08
APTX-230ENST00000494649 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
APTX-230ENST00000494649 TAF1LQ8IZX4 1826 aa14.56□□□□□ -0.08
APTX-230ENST00000494649 KRT24Q2M2I5 525 aa14.56□□□□□ -0.08
APTX-230ENST00000494649 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
APTX-230ENST00000494649 C4BP0C0L5 1744 aa14.55□□□□□ -0.08
APTX-230ENST00000494649 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
APTX-230ENST00000494649 WWC1Q8IX03 1113 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
APTX-230ENST00000494649 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 PNPLA7Q6ZV29 1317 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 UBR2Q8IWV8 1755 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 ZBTB7AO95365 584 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 TJP1Q07157 1748 aa14.54□□□□□ -0.08
APTX-230ENST00000494649 CANXP27824 592 aaKnown RBP14.53□□□□□ -0.08
APTX-230ENST00000494649 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
APTX-230ENST00000494649 TUBGCP6Q96RT7 1819 aa14.52□□□□□ -0.08
APTX-230ENST00000494649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.52□□□□□ -0.09
APTX-230ENST00000494649 CYP19A1P11511 503 aaPredicted RBP14.52□□□□□ -0.09
APTX-230ENST00000494649 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.09
APTX-230ENST00000494649 COL23A1Q86Y22 540 aaPredicted RBP14.52□□□□□ -0.09
APTX-230ENST00000494649 NECTIN2Q92692 538 aa14.52□□□□□ -0.09
APTX-230ENST00000494649 MBIPQ9NS73 344 aa14.52□□□□□ -0.09
APTX-230ENST00000494649 ZBTB1Q9Y2K1 713 aa14.52□□□□□ -0.09
APTX-230ENST00000494649 A1BGP04217 495 aa14.51□□□□□ -0.09
APTX-230ENST00000494649 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
APTX-230ENST00000494649 KDM3BQ7LBC6 1761 aa14.51□□□□□ -0.09
APTX-230ENST00000494649 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
APTX-230ENST00000494649 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
APTX-230ENST00000494649 CHL1O00533 1208 aa14.51□□□□□ -0.09
APTX-230ENST00000494649 MSL1Q68DK7 614 aa14.51□□□□□ -0.09
APTX-230ENST00000494649 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
APTX-230ENST00000494649 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
APTX-230ENST00000494649 SNRPA1P09661 255 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms