RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 LINC00116Q8NCU8 138 aa30.19■■■□□ 2.42
CDKN2A-206ENST00000494262 ATP6V1AP38606 617 aa30.18■■■□□ 2.42
CDKN2A-206ENST00000494262 CABP4P57796 275 aa30.18■■■□□ 2.42
CDKN2A-206ENST00000494262 MSL1Q68DK7 614 aa30.18■■■□□ 2.42
CDKN2A-206ENST00000494262 UTRNP46939 3433 aa30.17■■■□□ 2.42
CDKN2A-206ENST00000494262 DIAPH1O60610 1272 aaKnown RBP30.17■■■□□ 2.42
CDKN2A-206ENST00000494262 HMOX1P09601 288 aa30.17■■■□□ 2.42
CDKN2A-206ENST00000494262 ITPK1Q13572 414 aa30.17■■■□□ 2.42
CDKN2A-206ENST00000494262 AMIGO3Q86WK7 504 aa30.16■■■□□ 2.42
CDKN2A-206ENST00000494262 PHF14O94880 888 aa30.15■■■□□ 2.42
CDKN2A-206ENST00000494262 UBR3Q6ZT12 1888 aa30.13■■■□□ 2.41
CDKN2A-206ENST00000494262 YY1P25490 414 aa30.13■■■□□ 2.41
CDKN2A-206ENST00000494262 SMIM5Q71RC9 77 aa30.13■■■□□ 2.41
CDKN2A-206ENST00000494262 RBM42Q9BTD8 480 aaKnown RBP30.13■■■□□ 2.41
CDKN2A-206ENST00000494262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.12■■■□□ 2.41
CDKN2A-206ENST00000494262 AKAP4Q5JQC9 854 aa30.11■■■□□ 2.41
CDKN2A-206ENST00000494262 GNPATO15228 680 aa30.1■■■□□ 2.41
CDKN2A-206ENST00000494262 SSFA2P28290 1259 aa30.1■■■□□ 2.41
CDKN2A-206ENST00000494262 NFATC2IPQ8NCF5 419 aa30.1■■■□□ 2.41
CDKN2A-206ENST00000494262 COL3A1P02461 1466 aaPredicted RBP30.1■■■□□ 2.41
CDKN2A-206ENST00000494262 SLC4A9Q96Q91 983 aa30.09■■■□□ 2.41
CDKN2A-206ENST00000494262 GOLGB1Q14789 3259 aaKnown RBP30.07■■■□□ 2.4
CDKN2A-206ENST00000494262 SCN11AQ9UI33 1791 aa30.06■■■□□ 2.4
CDKN2A-206ENST00000494262 U2SURPO15042 1029 aaKnown RBP30.06■■■□□ 2.4
CDKN2A-206ENST00000494262 ZNF831Q5JPB2 1677 aa30.05■■■□□ 2.4
CDKN2A-206ENST00000494262 NLGN2Q8NFZ4 835 aa30.05■■■□□ 2.4
CDKN2A-206ENST00000494262 PTCD1O75127 700 aaKnown RBP30.04■■■□□ 2.4
CDKN2A-206ENST00000494262 MTHFSDQ2M296 383 aaKnown RBP30.04■■■□□ 2.4
CDKN2A-206ENST00000494262 LGR6Q9HBX8 967 aa30.03■■■□□ 2.4
CDKN2A-206ENST00000494262 GPR162Q16538 588 aa30.02■■■□□ 2.4
CDKN2A-206ENST00000494262 RNMTO43148 476 aaKnown RBP30.01■■■□□ 2.39
CDKN2A-206ENST00000494262 SLC52A2Q9HAB3 445 aa30.01■■■□□ 2.39
CDKN2A-206ENST00000494262 COL5A3P25940 1745 aaPredicted RBP30■■■□□ 2.39
CDKN2A-206ENST00000494262 RC3H1Q5TC82 1133 aaKnown RBP30■■■□□ 2.39
CDKN2A-206ENST00000494262 PELP1Q8IZL8 1130 aaKnown RBP30■■■□□ 2.39
CDKN2A-206ENST00000494262 CFAP53Q96M91 514 aa30■■■□□ 2.39
CDKN2A-206ENST00000494262 RTCBQ9Y3I0 505 aaKnown RBP30■■■□□ 2.39
CDKN2A-206ENST00000494262 CNTNAP4Q9C0A0 1308 aa29.98■■■□□ 2.39
CDKN2A-206ENST00000494262 TRAPPC3LQ5T215 181 aa29.97■■■□□ 2.39
CDKN2A-206ENST00000494262 MRC1P22897 1456 aa29.97■■■□□ 2.39
CDKN2A-206ENST00000494262 PPP2R1AP30153 589 aa29.96■■■□□ 2.39
CDKN2A-206ENST00000494262 CD2APQ9Y5K6 639 aa29.95■■■□□ 2.39
CDKN2A-206ENST00000494262 VIRMAQ69YN4 1812 aaKnown RBP29.94■■■□□ 2.38
CDKN2A-206ENST00000494262 RPS6KA4O75676 772 aa29.93■■■□□ 2.38
CDKN2A-206ENST00000494262 ADRA2BP18089 450 aa29.93■■■□□ 2.38
CDKN2A-206ENST00000494262 ADAMTS7Q9UKP4 1686 aa29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 MYH14Q7Z406 1995 aaKnown RBP29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 CRKLP46109 303 aaKnown RBP29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 TJP1Q07157 1748 aa29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 SLC39A6Q13433 755 aa29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 GAS2L2Q8NHY3 880 aa29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 ARHGEF1Q92888 912 aaKnown RBP29.92■■■□□ 2.38
CDKN2A-206ENST00000494262 NUDCQ9Y266 331 aa29.91■■■□□ 2.38
CDKN2A-206ENST00000494262 RFC4P35249 363 aa29.9■■■□□ 2.38
CDKN2A-206ENST00000494262 CHD4Q14839 1912 aa29.89■■■□□ 2.38
CDKN2A-206ENST00000494262 MMP10P09238 476 aa29.89■■■□□ 2.38
CDKN2A-206ENST00000494262 CICQ96RK0 1608 aaPredicted RBP29.89■■■□□ 2.37
CDKN2A-206ENST00000494262 GNAT3A8MTJ3 354 aa29.88■■■□□ 2.37
CDKN2A-206ENST00000494262 PRKAR2BP31323 418 aa29.88■■■□□ 2.37
CDKN2A-206ENST00000494262 DNAJC10Q8IXB1 793 aa29.88■■■□□ 2.37
CDKN2A-206ENST00000494262 RSPH6AQ9H0K4 717 aa29.88■■■□□ 2.37
CDKN2A-206ENST00000494262 U2AF1L5P0DN76 240 aaPredicted RBP29.86■■■□□ 2.37
CDKN2A-206ENST00000494262 YBX3P16989 372 aaKnown RBP eCLIP29.86■■■□□ 2.37
CDKN2A-206ENST00000494262 U2AF1Q01081 240 aaKnown RBP eCLIP29.86■■■□□ 2.37
CDKN2A-206ENST00000494262 NLGN1Q8N2Q7 840 aa29.86■■■□□ 2.37
CDKN2A-206ENST00000494262 KCPQ6ZWJ8 1503 aa29.86■■■□□ 2.37
CDKN2A-206ENST00000494262 GYS1P13807 737 aa29.85■■■□□ 2.37
CDKN2A-206ENST00000494262 PHACTR3Q96KR7 559 aa29.85■■■□□ 2.37
CDKN2A-206ENST00000494262 INTS5Q6P9B9 1019 aaKnown RBP29.84■■■□□ 2.37
CDKN2A-206ENST00000494262 IL17REQ8NFR9 667 aa29.84■■■□□ 2.37
CDKN2A-206ENST00000494262 C4AP0C0L4 1744 aa29.83■■■□□ 2.37
CDKN2A-206ENST00000494262 TEFQ10587 303 aa29.83■■■□□ 2.37
CDKN2A-206ENST00000494262 GRIN3BO60391 1043 aa29.82■■■□□ 2.36
CDKN2A-206ENST00000494262 CCDC87Q9NVE4 849 aa29.82■■■□□ 2.36
CDKN2A-206ENST00000494262 TTC5Q8N0Z6 440 aa29.81■■■□□ 2.36
CDKN2A-206ENST00000494262 CYP19A1P11511 503 aaPredicted RBP29.8■■■□□ 2.36
CDKN2A-206ENST00000494262 ZNF784Q8NCA9 323 aaPredicted RBP29.8■■■□□ 2.36
CDKN2A-206ENST00000494262 SRP68Q9UHB9 627 aaKnown RBP29.8■■■□□ 2.36
CDKN2A-206ENST00000494262 VSIG10Q8N0Z9 540 aa29.79■■■□□ 2.36
CDKN2A-206ENST00000494262 USP42Q9H9J4 1324 aaKnown RBP29.78■■■□□ 2.36
CDKN2A-206ENST00000494262 UBR2Q8IWV8 1755 aa29.78■■■□□ 2.36
CDKN2A-206ENST00000494262 FCHSD2O94868 740 aa29.78■■■□□ 2.36
CDKN2A-206ENST00000494262 WWC3Q9ULE0 1092 aa29.77■■■□□ 2.36
CDKN2A-206ENST00000494262 SOS1Q07889 1333 aaPredicted RBP29.76■■■□□ 2.36
CDKN2A-206ENST00000494262 PARP3Q9Y6F1 533 aa29.76■■■□□ 2.35
CDKN2A-206ENST00000494262 CEMIPQ8WUJ3 1361 aa29.76■■■□□ 2.35
CDKN2A-206ENST00000494262 SIPA1L3O60292 1781 aaPredicted RBP29.75■■■□□ 2.35
CDKN2A-206ENST00000494262 FKBP8Q14318 412 aa29.75■■■□□ 2.35
CDKN2A-206ENST00000494262 ZNF790Q6PG37 636 aa29.75■■■□□ 2.35
CDKN2A-206ENST00000494262 ZBTB1Q9Y2K1 713 aa29.74■■■□□ 2.35
CDKN2A-206ENST00000494262 ZPR1O75312 459 aa29.73■■■□□ 2.35
CDKN2A-206ENST00000494262 ZNF496Q96IT1 587 aaPredicted RBP29.73■■■□□ 2.35
CDKN2A-206ENST00000494262 C10orf71Q711Q0 1435 aa29.72■■■□□ 2.35
CDKN2A-206ENST00000494262 KIF13BQ9NQT8 1826 aa29.71■■■□□ 2.35
CDKN2A-206ENST00000494262 STARD3NLO95772 234 aa29.71■■■□□ 2.35
CDKN2A-206ENST00000494262 USPL1Q5W0Q7 1092 aa29.71■■■□□ 2.35
CDKN2A-206ENST00000494262 RTF1Q92541 710 aaKnown RBP29.71■■■□□ 2.35
CDKN2A-206ENST00000494262 PXDNLA1KZ92 1463 aa29.7■■■□□ 2.35
CDKN2A-206ENST00000494262 COL15A1P39059 1388 aa29.7■■■□□ 2.35
CDKN2A-206ENST00000494262 HEG1Q9ULI3 1381 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms