RNA–Protein interactions for RNA: ENST00000492536.5

RUSC1-215, Transcript of RUN and SH3 domain containing 1, human

TSL 3

Gene RUSC1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-215	ENST00000492536	ATP6V1A	P38606	617 aa		32.06	■■■□□ 2.72
RUSC1-215	ENST00000492536	MTHFS	P49914	203 aa		32.06	■■■□□ 2.72
RUSC1-215	ENST00000492536	MSL1	Q68DK7	614 aa		32.06	■■■□□ 2.72
RUSC1-215	ENST00000492536	KDM6A	O15550	1401 aa	Predicted RBP	32.06	■■■□□ 2.72
RUSC1-215	ENST00000492536	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.05	■■■□□ 2.72
RUSC1-215	ENST00000492536	ITPK1	Q13572	414 aa		32.04	■■■□□ 2.72
RUSC1-215	ENST00000492536	NPC1L1	Q9UHC9	1359 aa		32.04	■■■□□ 2.72
RUSC1-215	ENST00000492536	PHF14	O94880	888 aa		32.03	■■■□□ 2.72
RUSC1-215	ENST00000492536	CABP4	P57796	275 aa		32.03	■■■□□ 2.72
RUSC1-215	ENST00000492536	GPR162	Q16538	588 aa		32.03	■■■□□ 2.72
RUSC1-215	ENST00000492536	AMIGO3	Q86WK7	504 aa		32.03	■■■□□ 2.72
RUSC1-215	ENST00000492536	CC2D1B	Q5T0F9	858 aa	Known RBP	32.02	■■■□□ 2.72
RUSC1-215	ENST00000492536	ZNF831	Q5JPB2	1677 aa		32.02	■■■□□ 2.72
RUSC1-215	ENST00000492536	GNPAT	O15228	680 aa		32	■■■□□ 2.71
RUSC1-215	ENST00000492536	NLGN2	Q8NFZ4	835 aa		32	■■■□□ 2.71
RUSC1-215	ENST00000492536	CD2AP	Q9Y5K6	639 aa		31.98	■■■□□ 2.71
RUSC1-215	ENST00000492536	CHD4	Q14839	1912 aa		31.97	■■■□□ 2.71
RUSC1-215	ENST00000492536	GOLGB1	Q14789	3259 aa	Known RBP	31.97	■■■□□ 2.71
RUSC1-215	ENST00000492536	RBM42	Q9BTD8	480 aa	Known RBP	31.96	■■■□□ 2.71
RUSC1-215	ENST00000492536	DIAPH1	O60610	1272 aa	Known RBP	31.95	■■■□□ 2.71
RUSC1-215	ENST00000492536	AKAP4	Q5JQC9	854 aa		31.95	■■■□□ 2.71
RUSC1-215	ENST00000492536	SLC4A9	Q96Q91	983 aa		31.94	■■■□□ 2.7
RUSC1-215	ENST00000492536	RC3H1	Q5TC82	1133 aa	Known RBP	31.93	■■■□□ 2.7
RUSC1-215	ENST00000492536	SMIM5	Q71RC9	77 aa		31.93	■■■□□ 2.7
RUSC1-215	ENST00000492536	PELP1	Q8IZL8	1130 aa	Known RBP	31.93	■■■□□ 2.7
RUSC1-215	ENST00000492536	RTCB	Q9Y3I0	505 aa	Known RBP	31.93	■■■□□ 2.7
RUSC1-215	ENST00000492536	NFATC2IP	Q8NCF5	419 aa		31.92	■■■□□ 2.7
RUSC1-215	ENST00000492536	CNTNAP4	Q9C0A0	1308 aa		31.92	■■■□□ 2.7
RUSC1-215	ENST00000492536	HMOX1	P09601	288 aa		31.9	■■■□□ 2.7
RUSC1-215	ENST00000492536	ADRA2B	P18089	450 aa		31.9	■■■□□ 2.7
RUSC1-215	ENST00000492536	COL5A3	P25940	1745 aa	Predicted RBP	31.89	■■■□□ 2.7
RUSC1-215	ENST00000492536	SCN11A	Q9UI33	1791 aa		31.89	■■■□□ 2.7
RUSC1-215	ENST00000492536	GRIN3B	O60391	1043 aa		31.89	■■■□□ 2.7
RUSC1-215	ENST00000492536	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.89	■■■□□ 2.7
RUSC1-215	ENST00000492536	TRAPPC3L	Q5T215	181 aa		31.88	■■■□□ 2.69
RUSC1-215	ENST00000492536	PTCD1	O75127	700 aa	Known RBP	31.86	■■■□□ 2.69
RUSC1-215	ENST00000492536	RPS6KA4	O75676	772 aa		31.85	■■■□□ 2.69
RUSC1-215	ENST00000492536	SLC52A2	Q9HAB3	445 aa		31.85	■■■□□ 2.69
RUSC1-215	ENST00000492536	COL3A1	P02461	1466 aa	Predicted RBP	31.84	■■■□□ 2.69
RUSC1-215	ENST00000492536	YBX3	P16989	372 aa	Known RBP eCLIP	31.84	■■■□□ 2.69
RUSC1-215	ENST00000492536	MRC1	P22897	1456 aa		31.84	■■■□□ 2.69
RUSC1-215	ENST00000492536	CIC	Q96RK0	1608 aa	Predicted RBP	31.83	■■■□□ 2.69
RUSC1-215	ENST00000492536	MTHFSD	Q2M296	383 aa	Known RBP	31.82	■■■□□ 2.68
RUSC1-215	ENST00000492536	NLGN1	Q8N2Q7	840 aa		31.82	■■■□□ 2.68
RUSC1-215	ENST00000492536	RNMT	O43148	476 aa	Known RBP	31.81	■■■□□ 2.68
RUSC1-215	ENST00000492536	CNGB1	Q14028	1251 aa	Predicted RBP	31.81	■■■□□ 2.68
RUSC1-215	ENST00000492536	ARHGEF1	Q92888	912 aa	Known RBP	31.81	■■■□□ 2.68
RUSC1-215	ENST00000492536	RFC4	P35249	363 aa		31.8	■■■□□ 2.68
RUSC1-215	ENST00000492536	LGR6	Q9HBX8	967 aa		31.8	■■■□□ 2.68
RUSC1-215	ENST00000492536	MMP10	P09238	476 aa		31.79	■■■□□ 2.68
RUSC1-215	ENST00000492536	CRKL	P46109	303 aa	Known RBP	31.79	■■■□□ 2.68
RUSC1-215	ENST00000492536	U2SURP	O15042	1029 aa	Known RBP	31.78	■■■□□ 2.68
RUSC1-215	ENST00000492536	ADAMTS7	Q9UKP4	1686 aa		31.78	■■■□□ 2.68
RUSC1-215	ENST00000492536	MYH14	Q7Z406	1995 aa	Known RBP	31.77	■■■□□ 2.68
RUSC1-215	ENST00000492536	TJP1	Q07157	1748 aa		31.76	■■■□□ 2.67
RUSC1-215	ENST00000492536	CFAP53	Q96M91	514 aa		31.76	■■■□□ 2.67
RUSC1-215	ENST00000492536	GYS1	P13807	737 aa		31.74	■■■□□ 2.67
RUSC1-215	ENST00000492536	GAS2L2	Q8NHY3	880 aa		31.74	■■■□□ 2.67
RUSC1-215	ENST00000492536	C4A	P0C0L4	1744 aa		31.72	■■■□□ 2.67
RUSC1-215	ENST00000492536	VIRMA	Q69YN4	1812 aa	Known RBP	31.72	■■■□□ 2.67
RUSC1-215	ENST00000492536	SLC39A6	Q13433	755 aa		31.69	■■■□□ 2.66
RUSC1-215	ENST00000492536	INTS5	Q6P9B9	1019 aa	Known RBP	31.69	■■■□□ 2.66
RUSC1-215	ENST00000492536	DNAJC10	Q8IXB1	793 aa		31.69	■■■□□ 2.66
RUSC1-215	ENST00000492536	VSIG10	Q8N0Z9	540 aa		31.69	■■■□□ 2.66
RUSC1-215	ENST00000492536	KCP	Q6ZWJ8	1503 aa		31.69	■■■□□ 2.66
RUSC1-215	ENST00000492536	KIF13B	Q9NQT8	1826 aa		31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	GNAT3	A8MTJ3	354 aa		31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	CCDC87	Q9NVE4	849 aa		31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	NUDC	Q9Y266	331 aa		31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	PARP3	Q9Y6F1	533 aa		31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	USP42	Q9H9J4	1324 aa	Known RBP	31.68	■■■□□ 2.66
RUSC1-215	ENST00000492536	C10orf71	Q711Q0	1435 aa		31.67	■■■□□ 2.66
RUSC1-215	ENST00000492536	TGFB2	P61812	414 aa		31.67	■■■□□ 2.66
RUSC1-215	ENST00000492536	CYP19A1	P11511	503 aa	Predicted RBP	31.65	■■■□□ 2.66
RUSC1-215	ENST00000492536	PXDNL	A1KZ92	1463 aa		31.65	■■■□□ 2.66
RUSC1-215	ENST00000492536	PPP2R1A	P30153	589 aa		31.64	■■■□□ 2.66
RUSC1-215	ENST00000492536	TEF	Q10587	303 aa		31.64	■■■□□ 2.66
RUSC1-215	ENST00000492536	TTC5	Q8N0Z6	440 aa		31.64	■■■□□ 2.66
RUSC1-215	ENST00000492536	SRP68	Q9UHB9	627 aa	Known RBP	31.63	■■■□□ 2.65
RUSC1-215	ENST00000492536	SOS1	Q07889	1333 aa	Predicted RBP	31.63	■■■□□ 2.65
RUSC1-215	ENST00000492536	UBR2	Q8IWV8	1755 aa		31.62	■■■□□ 2.65
RUSC1-215	ENST00000492536	IL17RE	Q8NFR9	667 aa		31.62	■■■□□ 2.65
RUSC1-215	ENST00000492536	RSPH6A	Q9H0K4	717 aa		31.62	■■■□□ 2.65
RUSC1-215	ENST00000492536	PRKAR2B	P31323	418 aa		31.61	■■■□□ 2.65
RUSC1-215	ENST00000492536	ZPR1	O75312	459 aa		31.6	■■■□□ 2.65
RUSC1-215	ENST00000492536	FKBP8	Q14318	412 aa		31.6	■■■□□ 2.65
RUSC1-215	ENST00000492536	KIAA1551	Q9HCM1	1747 aa		31.59	■■■□□ 2.65
RUSC1-215	ENST00000492536	WWC3	Q9ULE0	1092 aa		31.59	■■■□□ 2.65
RUSC1-215	ENST00000492536	CEMIP	Q8WUJ3	1361 aa		31.58	■■■□□ 2.65
RUSC1-215	ENST00000492536	STARD3NL	O95772	234 aa		31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	ZNF790	Q6PG37	636 aa		31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	PHACTR3	Q96KR7	559 aa		31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	ZBTB1	Q9Y2K1	713 aa		31.57	■■■□□ 2.64
RUSC1-215	ENST00000492536	COL15A1	P39059	1388 aa		31.56	■■■□□ 2.64
RUSC1-215	ENST00000492536	GIGYF1	O75420	1035 aa	Predicted RBP	31.56	■■■□□ 2.64
RUSC1-215	ENST00000492536	FCHSD2	O94868	740 aa		31.55	■■■□□ 2.64
RUSC1-215	ENST00000492536	NARF	Q9UHQ1	456 aa		31.55	■■■□□ 2.64
RUSC1-215	ENST00000492536	SIPA1L3	O60292	1781 aa	Predicted RBP	31.55	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms