RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 GOLGA6L1Q8N7Z2 621 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 SLU7O95391 586 aaKnown RBP11.56□□□□□ -0.56
VPS8-225ENST00000492449 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 ZRANB2O95218 330 aaKnown RBP eCLIP11.56□□□□□ -0.56
VPS8-225ENST00000492449 CCDC172P0C7W6 258 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 PNMA6AP0CW24 399 aaPredicted RBP11.56□□□□□ -0.56
VPS8-225ENST00000492449 FBLN2P98095 1184 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 PSD3Q9NYI0 1048 aa11.56□□□□□ -0.56
VPS8-225ENST00000492449 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
VPS8-225ENST00000492449 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 RGS12O14924 1447 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 ELP1O95163 1332 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 CDC25BP30305 580 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 MLECQ14165 292 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 TSGA10IPQ3SY00 556 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 FOXD4L5Q5VV16 416 aaPredicted RBP11.55□□□□□ -0.56
VPS8-225ENST00000492449 CCDC186Q7Z3E2 898 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 GOLGA5Q8TBA6 731 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 FOXD4L4Q8WXT5 416 aaPredicted RBP11.55□□□□□ -0.56
VPS8-225ENST00000492449 GPS2Q13227 327 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 CT47A1Q5JQC4 288 aaPredicted RBP11.55□□□□□ -0.56
VPS8-225ENST00000492449 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
VPS8-225ENST00000492449 SPAG9O60271 1321 aaKnown RBP11.54□□□□□ -0.56
VPS8-225ENST00000492449 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 KIF2AO00139 706 aaPredicted RBP11.54□□□□□ -0.56
VPS8-225ENST00000492449 NEMFO60524 1076 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 ZSCAN26Q16670 478 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 CDC42BPBQ9Y5S2 1711 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 TRIM66O15016 1216 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 LRMPQ12912 555 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
VPS8-225ENST00000492449 L2HGDHQ9H9P8 463 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 LCMT1Q9UIC8 334 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
VPS8-225ENST00000492449 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 GSCP56915 257 aaPredicted RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 DONSONQ9NYP3 566 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 KIF1CO43896 1103 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 TSPY4P0CV99 314 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 TSPY10P0CW01 314 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 CLCN6P51797 869 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 GYS2P54840 703 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 NOM1Q5C9Z4 860 aaKnown RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
VPS8-225ENST00000492449 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 GTF3C6Q969F1 213 aa11.53□□□□□ -0.56
VPS8-225ENST00000492449 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.56
VPS8-225ENST00000492449 ERC2O15083 957 aa11.52□□□□□ -0.56
VPS8-225ENST00000492449 PRR29P0C7W0 189 aa11.52□□□□□ -0.56
VPS8-225ENST00000492449 ANAPC15P60006 121 aa11.52□□□□□ -0.56
VPS8-225ENST00000492449 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.56
VPS8-225ENST00000492449 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.56
VPS8-225ENST00000492449 ZNF75DP51815 510 aa11.52□□□□□ -0.57
VPS8-225ENST00000492449 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
VPS8-225ENST00000492449 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
VPS8-225ENST00000492449 MAGEA9P43362 315 aa11.52□□□□□ -0.57
VPS8-225ENST00000492449 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.57
VPS8-225ENST00000492449 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
VPS8-225ENST00000492449 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
VPS8-225ENST00000492449 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
VPS8-225ENST00000492449 NEK4P51957 841 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 GIMAP6Q6P9H5 292 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 DCTPP1Q9H773 170 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 SDSP20132 328 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 TMX1Q9H3N1 280 aa11.51□□□□□ -0.57
VPS8-225ENST00000492449 TTC31Q49AM3 519 aaPredicted RBP11.5□□□□□ -0.57
VPS8-225ENST00000492449 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
VPS8-225ENST00000492449 CACTINQ8WUQ7 758 aaKnown RBP11.5□□□□□ -0.57
VPS8-225ENST00000492449 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 ABCC4O15439 1325 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 CCDC91Q7Z6B0 441 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 FAM135BQ49AJ0 1406 aa11.5□□□□□ -0.57
VPS8-225ENST00000492449 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms