RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
LSS-210ENST00000491729 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
LSS-210ENST00000491729 RWDD1Q9H446 243 aaPredicted RBP16.67■□□□□ 0.26
LSS-210ENST00000491729 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
LSS-210ENST00000491729 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
LSS-210ENST00000491729 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
LSS-210ENST00000491729 ZCRB1Q8TBF4 217 aaKnown RBP16.66■□□□□ 0.26
LSS-210ENST00000491729 BCL2L13Q9BXK5 485 aa16.66■□□□□ 0.26
LSS-210ENST00000491729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.66■□□□□ 0.26
LSS-210ENST00000491729 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
LSS-210ENST00000491729 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
LSS-210ENST00000491729 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
LSS-210ENST00000491729 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
LSS-210ENST00000491729 RLBP1P12271 317 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 GNAI1P63096 354 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
LSS-210ENST00000491729 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
LSS-210ENST00000491729 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 SHANK3Q9BYB0 1731 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
LSS-210ENST00000491729 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
LSS-210ENST00000491729 VAMP4O75379 141 aa16.63■□□□□ 0.25
LSS-210ENST00000491729 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
LSS-210ENST00000491729 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
LSS-210ENST00000491729 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
LSS-210ENST00000491729 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
LSS-210ENST00000491729 TAF7Q15545 349 aaPredicted RBP16.61■□□□□ 0.25
LSS-210ENST00000491729 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 USP21Q9UK80 565 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 NWD2Q9ULI1 1742 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
LSS-210ENST00000491729 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
LSS-210ENST00000491729 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
LSS-210ENST00000491729 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
LSS-210ENST00000491729 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
LSS-210ENST00000491729 AFF2P51816 1311 aa16.6■□□□□ 0.25
LSS-210ENST00000491729 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
LSS-210ENST00000491729 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
LSS-210ENST00000491729 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
LSS-210ENST00000491729 VPS72Q15906 364 aa16.59■□□□□ 0.25
LSS-210ENST00000491729 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
LSS-210ENST00000491729 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
LSS-210ENST00000491729 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
LSS-210ENST00000491729 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.25
LSS-210ENST00000491729 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.25
LSS-210ENST00000491729 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
LSS-210ENST00000491729 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 TRIM27P14373 513 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
LSS-210ENST00000491729 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
LSS-210ENST00000491729 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 SLC52A2Q9HAB3 445 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 EP400Q96L91 3159 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 TEFQ10587 303 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
LSS-210ENST00000491729 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
LSS-210ENST00000491729 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
LSS-210ENST00000491729 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
LSS-210ENST00000491729 BECN1Q14457 450 aa16.56■□□□□ 0.24
LSS-210ENST00000491729 MARCH10Q8NA82 808 aaPredicted RBP16.56■□□□□ 0.24
LSS-210ENST00000491729 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
LSS-210ENST00000491729 EXOC5O00471 708 aa16.55■□□□□ 0.24
LSS-210ENST00000491729 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
LSS-210ENST00000491729 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
LSS-210ENST00000491729 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
LSS-210ENST00000491729 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
LSS-210ENST00000491729 TOGARAM1Q9Y4F4 1720 aa16.54■□□□□ 0.24
LSS-210ENST00000491729 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
LSS-210ENST00000491729 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
LSS-210ENST00000491729 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
LSS-210ENST00000491729 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
LSS-210ENST00000491729 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
LSS-210ENST00000491729 GLI3P10071 1580 aa16.53■□□□□ 0.24
LSS-210ENST00000491729 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
LSS-210ENST00000491729 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.24
LSS-210ENST00000491729 DDB1Q16531 1140 aa16.52■□□□□ 0.23
LSS-210ENST00000491729 FBXO41Q8TF61 875 aa16.52■□□□□ 0.23
LSS-210ENST00000491729 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.23
LSS-210ENST00000491729 CABP4P57796 275 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 MRPL50Q8N5N7 158 aaKnown RBP16.51■□□□□ 0.23
LSS-210ENST00000491729 MRC1P22897 1456 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 ZNF790Q6PG37 636 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 PIGBQ92521 554 aa16.51■□□□□ 0.23
LSS-210ENST00000491729 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
LSS-210ENST00000491729 ATRNO75882 1429 aa16.5■□□□□ 0.23
LSS-210ENST00000491729 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
LSS-210ENST00000491729 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
LSS-210ENST00000491729 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
LSS-210ENST00000491729 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms