RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
CDK9-204ENST00000491521 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
CDK9-204ENST00000491521 UTRNP46939 3433 aa18.3■□□□□ 0.52
CDK9-204ENST00000491521 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
CDK9-204ENST00000491521 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
CDK9-204ENST00000491521 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
CDK9-204ENST00000491521 YY1P25490 414 aa18.29■□□□□ 0.52
CDK9-204ENST00000491521 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
CDK9-204ENST00000491521 CABP4P57796 275 aa18.29■□□□□ 0.52
CDK9-204ENST00000491521 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
CDK9-204ENST00000491521 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
CDK9-204ENST00000491521 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
CDK9-204ENST00000491521 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
CDK9-204ENST00000491521 ITPK1Q13572 414 aa18.28■□□□□ 0.52
CDK9-204ENST00000491521 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
CDK9-204ENST00000491521 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
CDK9-204ENST00000491521 DIAPH1O60610 1272 aaKnown RBP18.27■□□□□ 0.52
CDK9-204ENST00000491521 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.52
CDK9-204ENST00000491521 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
CDK9-204ENST00000491521 UBR3Q6ZT12 1888 aa18.26■□□□□ 0.51
CDK9-204ENST00000491521 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
CDK9-204ENST00000491521 GNPATO15228 680 aa18.26■□□□□ 0.51
CDK9-204ENST00000491521 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
CDK9-204ENST00000491521 KDRP35968 1356 aa18.26■□□□□ 0.51
CDK9-204ENST00000491521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
CDK9-204ENST00000491521 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
CDK9-204ENST00000491521 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
CDK9-204ENST00000491521 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
CDK9-204ENST00000491521 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
CDK9-204ENST00000491521 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
CDK9-204ENST00000491521 PPP2R1AP30153 589 aa18.23■□□□□ 0.51
CDK9-204ENST00000491521 GPR162Q16538 588 aa18.23■□□□□ 0.51
CDK9-204ENST00000491521 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
CDK9-204ENST00000491521 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
CDK9-204ENST00000491521 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
CDK9-204ENST00000491521 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
CDK9-204ENST00000491521 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
CDK9-204ENST00000491521 SSFA2P28290 1259 aa18.2■□□□□ 0.5
CDK9-204ENST00000491521 LGR6Q9HBX8 967 aa18.2■□□□□ 0.5
CDK9-204ENST00000491521 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
CDK9-204ENST00000491521 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
CDK9-204ENST00000491521 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
CDK9-204ENST00000491521 RTCBQ9Y3I0 505 aaKnown RBP18.18■□□□□ 0.5
CDK9-204ENST00000491521 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
CDK9-204ENST00000491521 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
CDK9-204ENST00000491521 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
CDK9-204ENST00000491521 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
CDK9-204ENST00000491521 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
CDK9-204ENST00000491521 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
CDK9-204ENST00000491521 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
CDK9-204ENST00000491521 CHD4Q14839 1912 aa18.15■□□□□ 0.5
CDK9-204ENST00000491521 MYH14Q7Z406 1995 aaKnown RBP18.15■□□□□ 0.5
CDK9-204ENST00000491521 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
CDK9-204ENST00000491521 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.49
CDK9-204ENST00000491521 CNTNAP4Q9C0A0 1308 aa18.14■□□□□ 0.49
CDK9-204ENST00000491521 TJP1Q07157 1748 aa18.13■□□□□ 0.49
CDK9-204ENST00000491521 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
CDK9-204ENST00000491521 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
CDK9-204ENST00000491521 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
CDK9-204ENST00000491521 MMP10P09238 476 aa18.12■□□□□ 0.49
CDK9-204ENST00000491521 RFC4P35249 363 aa18.12■□□□□ 0.49
CDK9-204ENST00000491521 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
CDK9-204ENST00000491521 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
CDK9-204ENST00000491521 RPS6KA4O75676 772 aa18.11■□□□□ 0.49
CDK9-204ENST00000491521 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDK9-204ENST00000491521 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
CDK9-204ENST00000491521 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
CDK9-204ENST00000491521 MRC1P22897 1456 aa18.11■□□□□ 0.49
CDK9-204ENST00000491521 U2AF1L5P0DN76 240 aaPredicted RBP18.1■□□□□ 0.49
CDK9-204ENST00000491521 U2AF1Q01081 240 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■□□□ 12.7
CDK9-204ENST00000491521 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
CDK9-204ENST00000491521 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
CDK9-204ENST00000491521 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
CDK9-204ENST00000491521 GNAT3A8MTJ3 354 aa18.09■□□□□ 0.49
CDK9-204ENST00000491521 ADRA2BP18089 450 aa18.09■□□□□ 0.49
CDK9-204ENST00000491521 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
CDK9-204ENST00000491521 SRP68Q9UHB9 627 aaKnown RBP18.09■□□□□ 0.49
CDK9-204ENST00000491521 TEFQ10587 303 aa18.08■□□□□ 0.48
CDK9-204ENST00000491521 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.48
CDK9-204ENST00000491521 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.48
CDK9-204ENST00000491521 CICQ96RK0 1608 aaPredicted RBP18.08■□□□□ 0.48
CDK9-204ENST00000491521 GYS1P13807 737 aa18.07■□□□□ 0.48
CDK9-204ENST00000491521 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
CDK9-204ENST00000491521 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
CDK9-204ENST00000491521 NLGN1Q8N2Q7 840 aa18.07■□□□□ 0.48
CDK9-204ENST00000491521 ZNF784Q8NCA9 323 aaPredicted RBP18.07■□□□□ 0.48
CDK9-204ENST00000491521 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
CDK9-204ENST00000491521 KCPQ6ZWJ8 1503 aa18.07■□□□□ 0.48
CDK9-204ENST00000491521 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
CDK9-204ENST00000491521 IL17REQ8NFR9 667 aa18.06■□□□□ 0.48
CDK9-204ENST00000491521 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
CDK9-204ENST00000491521 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDK9-204ENST00000491521 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
CDK9-204ENST00000491521 CYP19A1P11511 503 aaPredicted RBP18.04■□□□□ 0.48
CDK9-204ENST00000491521 FKBP8Q14318 412 aa18.03■□□□□ 0.48
CDK9-204ENST00000491521 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
CDK9-204ENST00000491521 UBR2Q8IWV8 1755 aa18.03■□□□□ 0.48
CDK9-204ENST00000491521 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
CDK9-204ENST00000491521 SIPA1L3O60292 1781 aaPredicted RBP18.02■□□□□ 0.48
CDK9-204ENST00000491521 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms