RNA–Protein interactions for RNA: ENST00000491381.5

SNX21-212, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-212ENST00000491381 BTBD11A6QL63 1104 aa27.58■■■□□ 2.01
SNX21-212ENST00000491381 TNNQ9UQP3 1299 aa27.58■■■□□ 2.01
SNX21-212ENST00000491381 MRC1P22897 1456 aa27.58■■■□□ 2.01
SNX21-212ENST00000491381 HOXB7P09629 217 aa27.57■■■□□ 2
SNX21-212ENST00000491381 MVPQ14764 893 aaKnown RBP27.57■■■□□ 2
SNX21-212ENST00000491381 CHMP4AQ9BY43 222 aa27.57■■■□□ 2
SNX21-212ENST00000491381 JCADQ9P266 1359 aa27.57■■■□□ 2
SNX21-212ENST00000491381 PLCH1Q4KWH8 1693 aa27.56■■■□□ 2
SNX21-212ENST00000491381 EIF4A1P60842 406 aaKnown RBP27.56■■■□□ 2
SNX21-212ENST00000491381 CLUAP1Q96AJ1 413 aa27.56■■■□□ 2
SNX21-212ENST00000491381 API5Q9BZZ5 524 aaKnown RBP27.55■■■□□ 2
SNX21-212ENST00000491381 SLC52A2Q9HAB3 445 aa27.55■■■□□ 2
SNX21-212ENST00000491381 NRAPQ86VF7 1730 aa27.53■■■□□ 2
SNX21-212ENST00000491381 DISP2A7MBM2 1401 aa27.53■■■□□ 2
SNX21-212ENST00000491381 NKX1-1Q15270 411 aaPredicted RBP27.52■■■□□ 2
SNX21-212ENST00000491381 CCDC30Q5VVM6 783 aa27.52■■■□□ 2
SNX21-212ENST00000491381 DDX19BQ9UMR2 479 aa27.52■■■□□ 2
SNX21-212ENST00000491381 PTPRCP08575 1304 aa27.52■■■□□ 2
SNX21-212ENST00000491381 NWD2Q9ULI1 1742 aa27.52■■■□□ 2
SNX21-212ENST00000491381 ADAMTS2O95450 1211 aa27.51■■□□□ 1.99
SNX21-212ENST00000491381 SHANK3Q9BYB0 1731 aa27.51■■□□□ 1.99
SNX21-212ENST00000491381 ABCC4O15439 1325 aa27.5■■□□□ 1.99
SNX21-212ENST00000491381 CACNA1FO60840 1977 aa27.5■■□□□ 1.99
SNX21-212ENST00000491381 HEG1Q9ULI3 1381 aa27.5■■□□□ 1.99
SNX21-212ENST00000491381 TCERG1O14776 1098 aaKnown RBP27.5■■□□□ 1.99
SNX21-212ENST00000491381 SLIT2O94813 1529 aa27.5■■□□□ 1.99
SNX21-212ENST00000491381 STK31Q9BXU1 1019 aa27.49■■□□□ 1.99
SNX21-212ENST00000491381 TMEM57Q8N5G2 664 aa27.49■■□□□ 1.99
SNX21-212ENST00000491381 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
SNX21-212ENST00000491381 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
SNX21-212ENST00000491381 SLC4A2P04920 1241 aa27.47■■□□□ 1.99
SNX21-212ENST00000491381 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
SNX21-212ENST00000491381 CHMP4BQ9H444 224 aaKnown RBP27.47■■□□□ 1.99
SNX21-212ENST00000491381 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
SNX21-212ENST00000491381 KCNQ3O43525 872 aa27.46■■□□□ 1.99
SNX21-212ENST00000491381 ITPRIPQ8IWB1 547 aa27.46■■□□□ 1.99
SNX21-212ENST00000491381 CDCA7Q9BWT1 371 aaPredicted RBP27.46■■□□□ 1.99
SNX21-212ENST00000491381 SPATA31A6Q5VVP1 1343 aa27.46■■□□□ 1.99
SNX21-212ENST00000491381 ERVV-2B6SEH9 535 aa27.45■■□□□ 1.99
SNX21-212ENST00000491381 CENPQQ7L2Z9 268 aaPredicted RBP27.45■■□□□ 1.98
SNX21-212ENST00000491381 NFATC2IPQ8NCF5 419 aa27.45■■□□□ 1.98
SNX21-212ENST00000491381 USP35Q9P2H5 1018 aa27.45■■□□□ 1.98
SNX21-212ENST00000491381 KDM2BQ8NHM5 1336 aa27.44■■□□□ 1.98
SNX21-212ENST00000491381 WNK3Q9BYP7 1800 aa27.44■■□□□ 1.98
SNX21-212ENST00000491381 HDGFL1Q5TGJ6 251 aa27.44■■□□□ 1.98
SNX21-212ENST00000491381 ZNF790Q6PG37 636 aa27.44■■□□□ 1.98
SNX21-212ENST00000491381 RGS12O14924 1447 aa27.44■■□□□ 1.98
SNX21-212ENST00000491381 CABP4P57796 275 aa27.43■■□□□ 1.98
SNX21-212ENST00000491381 SPATA31A1Q5TZJ5 1347 aa27.42■■□□□ 1.98
SNX21-212ENST00000491381 GIGYF1O75420 1035 aaPredicted RBP27.41■■□□□ 1.98
SNX21-212ENST00000491381 INTS3Q68E01 1043 aaKnown RBP27.4■■□□□ 1.98
SNX21-212ENST00000491381 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.98
SNX21-212ENST00000491381 SPATA31A5Q5VU36 1347 aa27.38■■□□□ 1.97
SNX21-212ENST00000491381 SPATA31A7Q8IWB4 1347 aa27.38■■□□□ 1.97
SNX21-212ENST00000491381 ZBTB40Q9NUA8 1239 aa27.38■■□□□ 1.97
SNX21-212ENST00000491381 TNS2Q63HR2 1409 aa27.37■■□□□ 1.97
SNX21-212ENST00000491381 FLIIQ13045 1269 aa27.37■■□□□ 1.97
SNX21-212ENST00000491381 G2E3Q7L622 706 aa27.37■■□□□ 1.97
SNX21-212ENST00000491381 UNC5CLQ8IV45 518 aa27.37■■□□□ 1.97
SNX21-212ENST00000491381 TTC5Q8N0Z6 440 aa27.37■■□□□ 1.97
SNX21-212ENST00000491381 ZBTB7BO15156 539 aaPredicted RBP27.36■■□□□ 1.97
SNX21-212ENST00000491381 LRP6O75581 1613 aa27.35■■□□□ 1.97
SNX21-212ENST00000491381 EXOC5O00471 708 aa27.35■■□□□ 1.97
SNX21-212ENST00000491381 SLC39A6Q13433 755 aa27.35■■□□□ 1.97
SNX21-212ENST00000491381 BARGINQ6ZT62 677 aa27.35■■□□□ 1.97
SNX21-212ENST00000491381 PCDHB15Q9Y5E8 787 aa27.35■■□□□ 1.97
SNX21-212ENST00000491381 EIF2S2P20042 333 aaKnown RBP27.34■■□□□ 1.97
SNX21-212ENST00000491381 FNBP4Q8N3X1 1017 aaPredicted RBP27.34■■□□□ 1.97
SNX21-212ENST00000491381 NECTIN2Q92692 538 aa27.34■■□□□ 1.97
SNX21-212ENST00000491381 FMNL2Q96PY5 1086 aa27.34■■□□□ 1.97
SNX21-212ENST00000491381 DBF4Q9UBU7 674 aaPredicted RBP27.34■■□□□ 1.97
SNX21-212ENST00000491381 PAPPAQ13219 1627 aa27.33■■□□□ 1.97
SNX21-212ENST00000491381 TOGARAM1Q9Y4F4 1720 aa27.32■■□□□ 1.96
SNX21-212ENST00000491381 BCL9LQ86UU0 1499 aa27.32■■□□□ 1.96
SNX21-212ENST00000491381 HSPA1LP34931 641 aa27.31■■□□□ 1.96
SNX21-212ENST00000491381 ZNF496Q96IT1 587 aaPredicted RBP27.31■■□□□ 1.96
SNX21-212ENST00000491381 NGLY1Q96IV0 654 aa27.31■■□□□ 1.96
SNX21-212ENST00000491381 RWDD1Q9H446 243 aaPredicted RBP27.31■■□□□ 1.96
SNX21-212ENST00000491381 CHPF2Q9P2E5 772 aa27.31■■□□□ 1.96
SNX21-212ENST00000491381 PXDNLA1KZ92 1463 aa27.31■■□□□ 1.96
SNX21-212ENST00000491381 SNRPA1P09661 255 aaKnown RBP27.3■■□□□ 1.96
SNX21-212ENST00000491381 CCT4P50991 539 aaKnown RBP27.3■■□□□ 1.96
SNX21-212ENST00000491381 VPS72Q15906 364 aa27.3■■□□□ 1.96
SNX21-212ENST00000491381 C8orf37Q96NL8 207 aa27.3■■□□□ 1.96
SNX21-212ENST00000491381 IGHDP01880 384 aa27.3■■□□□ 1.96
SNX21-212ENST00000491381 FKBP5Q13451 457 aaPredicted RBP27.3■■□□□ 1.96
SNX21-212ENST00000491381 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
SNX21-212ENST00000491381 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.29■■□□□ 1.96
SNX21-212ENST00000491381 HDAC1Q13547 482 aaPredicted RBP27.28■■□□□ 1.96
SNX21-212ENST00000491381 C5P01031 1676 aa27.28■■□□□ 1.96
SNX21-212ENST00000491381 GLI3P10071 1580 aa27.27■■□□□ 1.96
SNX21-212ENST00000491381 TMOD3Q9NYL9 352 aa27.27■■□□□ 1.96
SNX21-212ENST00000491381 N4BP2Q86UW6 1770 aaPredicted RBP27.27■■□□□ 1.96
SNX21-212ENST00000491381 DDB1Q16531 1140 aa27.27■■□□□ 1.96
SNX21-212ENST00000491381 DDX21Q9NR30 783 aaKnown RBP eCLIP27.27■■□□□ 1.96
SNX21-212ENST00000491381 HYPKQ9NX55 129 aa27.27■■□□□ 1.96
SNX21-212ENST00000491381 PRAMEF22A3QJZ6 481 aa27.26■■□□□ 1.95
SNX21-212ENST00000491381 PHAXQ9H814 394 aaKnown RBP27.26■■□□□ 1.95
SNX21-212ENST00000491381 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
SNX21-212ENST00000491381 CCDC9Q9Y3X0 531 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms