RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TK2O00142 265 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 HRO43593 1189 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-203ENST00000490391 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-203ENST00000490391 COL18A1P39060 1754 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 C2orf72A6NCS6 295 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 GCP02774 474 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 PRELPP51888 382 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 NLRP6P59044 892 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 BTAF1O14981 1849 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ACEP12821 1306 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 POLD1P28340 1107 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 APLP1P51693 650 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ABTB2Q8N961 1025 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 CDCA7Q9BWT1 371 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 WDR17Q8IZU2 1322 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 SLIT3O75094 1523 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 NLRP13Q86W25 1043 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 TNS4Q8IZW8 715 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 ABCC6O95255 1503 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 USP6P35125 1406 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 RGPD5Q99666 1765 aa10.65□□□□□ -0.7
PDLIM1-203ENST00000490391 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
PDLIM1-203ENST00000490391 EXOC5O00471 708 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 KAT6BQ8WYB5 2073 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 PSEN2P49810 448 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 PIK3C2AO00443 1686 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 TOMM70O94826 608 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 SLC27A3Q5K4L6 730 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 CICQ96RK0 1608 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 HTRA3P83110 453 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 CD2APQ9Y5K6 639 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 LY75O60449 1722 aa10.59□□□□□ -0.71
PDLIM1-203ENST00000490391 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
PDLIM1-203ENST00000490391 KCNQ4P56696 695 aa10.58□□□□□ -0.72
PDLIM1-203ENST00000490391 NFAT5O94916 1531 aa10.58□□□□□ -0.72
PDLIM1-203ENST00000490391 PTPN5P54829 565 aa10.57□□□□□ -0.72
PDLIM1-203ENST00000490391 COL23A1Q86Y22 540 aaPredicted RBP10.57□□□□□ -0.72
PDLIM1-203ENST00000490391 CSB-PGBD3P0DP91 1061 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 PPARGC1BQ86YN6 1023 aaKnown RBP10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
PDLIM1-203ENST00000490391 NSD2O96028 1365 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
PDLIM1-203ENST00000490391 IL2RBP14784 551 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
PDLIM1-203ENST00000490391 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
PDLIM1-203ENST00000490391 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 TOGARAM1Q9Y4F4 1720 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 HSPA1AP0DMV8 641 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 HSPA1BP0DMV9 641 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 FSTL1Q12841 308 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 C5P01031 1676 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms