RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 COL5A3P25940 1745 aaPredicted RBP26.59■■□□□ 1.85
SMC4-222ENST00000490207 AKAP4Q5JQC9 854 aa26.59■■□□□ 1.85
SMC4-222ENST00000490207 AK7Q96M32 723 aa26.59■■□□□ 1.85
SMC4-222ENST00000490207 MRC1P22897 1456 aa26.58■■□□□ 1.85
SMC4-222ENST00000490207 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
SMC4-222ENST00000490207 MSH5O43196 834 aa26.57■■□□□ 1.84
SMC4-222ENST00000490207 ATP6V1AP38606 617 aa26.57■■□□□ 1.84
SMC4-222ENST00000490207 COL23A1Q86Y22 540 aaPredicted RBP26.57■■□□□ 1.84
SMC4-222ENST00000490207 LINC00116Q8NCU8 138 aa26.57■■□□□ 1.84
SMC4-222ENST00000490207 ITPK1Q13572 414 aa26.55■■□□□ 1.84
SMC4-222ENST00000490207 ARXQ96QS3 562 aa26.55■■□□□ 1.84
SMC4-222ENST00000490207 POLD1P28340 1107 aa26.54■■□□□ 1.84
SMC4-222ENST00000490207 MTHFSDQ2M296 383 aaKnown RBP26.54■■□□□ 1.84
SMC4-222ENST00000490207 FLAD1Q8NFF5 587 aa26.54■■□□□ 1.84
SMC4-222ENST00000490207 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
SMC4-222ENST00000490207 RBM42Q9BTD8 480 aaKnown RBP26.53■■□□□ 1.84
SMC4-222ENST00000490207 FHDC1Q9C0D6 1143 aaPredicted RBP26.53■■□□□ 1.84
SMC4-222ENST00000490207 TJP1Q07157 1748 aa26.52■■□□□ 1.84
SMC4-222ENST00000490207 NFATC2IPQ8NCF5 419 aa26.52■■□□□ 1.84
SMC4-222ENST00000490207 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
SMC4-222ENST00000490207 PHF14O94880 888 aa26.5■■□□□ 1.83
SMC4-222ENST00000490207 AMIGO3Q86WK7 504 aa26.5■■□□□ 1.83
SMC4-222ENST00000490207 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
SMC4-222ENST00000490207 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
SMC4-222ENST00000490207 MAP3K5Q99683 1374 aa26.49■■□□□ 1.83
SMC4-222ENST00000490207 SSFA2P28290 1259 aa26.49■■□□□ 1.83
SMC4-222ENST00000490207 SLC52A2Q9HAB3 445 aa26.49■■□□□ 1.83
SMC4-222ENST00000490207 LGR6Q9HBX8 967 aa26.49■■□□□ 1.83
SMC4-222ENST00000490207 GNPATO15228 680 aa26.48■■□□□ 1.83
SMC4-222ENST00000490207 MSL1Q68DK7 614 aa26.48■■□□□ 1.83
SMC4-222ENST00000490207 SYT17Q9BSW7 474 aa26.48■■□□□ 1.83
SMC4-222ENST00000490207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.47■■□□□ 1.83
SMC4-222ENST00000490207 GAS2L2Q8NHY3 880 aa26.47■■□□□ 1.83
SMC4-222ENST00000490207 SIPA1L3O60292 1781 aaPredicted RBP26.46■■□□□ 1.83
SMC4-222ENST00000490207 RSPH6AQ9H0K4 717 aa26.46■■□□□ 1.83
SMC4-222ENST00000490207 DCAF8L1A6NGE4 600 aa26.45■■□□□ 1.82
SMC4-222ENST00000490207 PTCD1O75127 700 aaKnown RBP26.45■■□□□ 1.82
SMC4-222ENST00000490207 PRKAR2BP31323 418 aa26.45■■□□□ 1.82
SMC4-222ENST00000490207 SMIM5Q71RC9 77 aa26.45■■□□□ 1.82
SMC4-222ENST00000490207 KLHL34Q8N239 644 aa26.45■■□□□ 1.82
SMC4-222ENST00000490207 MYH14Q7Z406 1995 aaKnown RBP26.45■■□□□ 1.82
SMC4-222ENST00000490207 UBR2Q8IWV8 1755 aa26.45■■□□□ 1.82
SMC4-222ENST00000490207 C4AP0C0L4 1744 aa26.44■■□□□ 1.82
SMC4-222ENST00000490207 CNTNAP4Q9C0A0 1308 aa26.43■■□□□ 1.82
SMC4-222ENST00000490207 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
SMC4-222ENST00000490207 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
SMC4-222ENST00000490207 KCPQ6ZWJ8 1503 aa26.43■■□□□ 1.82
SMC4-222ENST00000490207 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
SMC4-222ENST00000490207 RC3H1Q5TC82 1133 aaKnown RBP26.4■■□□□ 1.82
SMC4-222ENST00000490207 RTCBQ9Y3I0 505 aaKnown RBP26.4■■□□□ 1.82
SMC4-222ENST00000490207 DDX10Q13206 875 aaKnown RBP26.39■■□□□ 1.82
SMC4-222ENST00000490207 PHACTR3Q96KR7 559 aa26.39■■□□□ 1.82
SMC4-222ENST00000490207 SLC39A6Q13433 755 aa26.38■■□□□ 1.81
SMC4-222ENST00000490207 FCHSD2O94868 740 aa26.37■■□□□ 1.81
SMC4-222ENST00000490207 ADRA2BP18089 450 aa26.35■■□□□ 1.81
SMC4-222ENST00000490207 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
SMC4-222ENST00000490207 TEFQ10587 303 aa26.35■■□□□ 1.81
SMC4-222ENST00000490207 TRAPPC3LQ5T215 181 aa26.35■■□□□ 1.81
SMC4-222ENST00000490207 IL17REQ8NFR9 667 aa26.35■■□□□ 1.81
SMC4-222ENST00000490207 CEMIPQ8WUJ3 1361 aa26.34■■□□□ 1.81
SMC4-222ENST00000490207 RPS6KA4O75676 772 aa26.34■■□□□ 1.81
SMC4-222ENST00000490207 RALBP1Q15311 655 aa26.34■■□□□ 1.81
SMC4-222ENST00000490207 DLG5Q8TDM6 1919 aa26.33■■□□□ 1.81
SMC4-222ENST00000490207 DNAJC10Q8IXB1 793 aa26.33■■□□□ 1.81
SMC4-222ENST00000490207 NLGN2Q8NFZ4 835 aa26.33■■□□□ 1.81
SMC4-222ENST00000490207 TTC5Q8N0Z6 440 aa26.32■■□□□ 1.8
SMC4-222ENST00000490207 ARHGEF1Q92888 912 aaKnown RBP26.31■■□□□ 1.8
SMC4-222ENST00000490207 ZEB1P37275 1124 aaPredicted RBP26.3■■□□□ 1.8
SMC4-222ENST00000490207 RFC4P35249 363 aa26.29■■□□□ 1.8
SMC4-222ENST00000490207 VSIG10Q8N0Z9 540 aa26.28■■□□□ 1.8
SMC4-222ENST00000490207 CCDC87Q9NVE4 849 aa26.28■■□□□ 1.8
SMC4-222ENST00000490207 CHD4Q14839 1912 aa26.27■■□□□ 1.8
SMC4-222ENST00000490207 NEFMP07197 916 aa26.27■■□□□ 1.8
SMC4-222ENST00000490207 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
SMC4-222ENST00000490207 RTF1Q92541 710 aaKnown RBP26.27■■□□□ 1.8
SMC4-222ENST00000490207 CD2APQ9Y5K6 639 aa26.27■■□□□ 1.8
SMC4-222ENST00000490207 MYBBP1AQ9BQG0 1328 aaKnown RBP26.26■■□□□ 1.79
SMC4-222ENST00000490207 CYP19A1P11511 503 aaPredicted RBP26.26■■□□□ 1.79
SMC4-222ENST00000490207 ZNF790Q6PG37 636 aa26.26■■□□□ 1.79
SMC4-222ENST00000490207 KIF13BQ9NQT8 1826 aa26.25■■□□□ 1.79
SMC4-222ENST00000490207 HEG1Q9ULI3 1381 aa26.25■■□□□ 1.79
SMC4-222ENST00000490207 MMP10P09238 476 aa26.25■■□□□ 1.79
SMC4-222ENST00000490207 YY1P25490 414 aa26.25■■□□□ 1.79
SMC4-222ENST00000490207 GPR162Q16538 588 aa26.25■■□□□ 1.79
SMC4-222ENST00000490207 SOS1Q07889 1333 aaPredicted RBP26.24■■□□□ 1.79
SMC4-222ENST00000490207 GYS1P13807 737 aa26.24■■□□□ 1.79
SMC4-222ENST00000490207 MCM10Q7L590 875 aa26.24■■□□□ 1.79
SMC4-222ENST00000490207 PELP1Q8IZL8 1130 aaKnown RBP26.24■■□□□ 1.79
SMC4-222ENST00000490207 NLGN1Q8N2Q7 840 aa26.24■■□□□ 1.79
SMC4-222ENST00000490207 ZNF496Q96IT1 587 aaPredicted RBP26.24■■□□□ 1.79
SMC4-222ENST00000490207 USP42Q9H9J4 1324 aaKnown RBP26.23■■□□□ 1.79
SMC4-222ENST00000490207 BTBD11A6QL63 1104 aa26.23■■□□□ 1.79
SMC4-222ENST00000490207 COL15A1P39059 1388 aa26.22■■□□□ 1.79
SMC4-222ENST00000490207 HTATSF1O43719 755 aaKnown RBP26.22■■□□□ 1.79
SMC4-222ENST00000490207 PLEKHF1Q96S99 279 aa26.22■■□□□ 1.79
SMC4-222ENST00000490207 ZBTB1Q9Y2K1 713 aa26.22■■□□□ 1.79
SMC4-222ENST00000490207 DCTN1Q14203 1278 aa26.21■■□□□ 1.79
SMC4-222ENST00000490207 FMNL2Q96PY5 1086 aa26.21■■□□□ 1.79
SMC4-222ENST00000490207 SRP68Q9UHB9 627 aaKnown RBP26.21■■□□□ 1.79
SMC4-222ENST00000490207 MAPK8IP3Q9UPT6 1336 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms