RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 STRCQ7RTU9 1775 aa17.55■□□□□ 0.4
ABCB1-207ENST00000488737 MED1Q15648 1581 aaPredicted RBP17.55■□□□□ 0.4
ABCB1-207ENST00000488737 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
ABCB1-207ENST00000488737 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
ABCB1-207ENST00000488737 FSD2A1L4K1 749 aa17.54■□□□□ 0.4
ABCB1-207ENST00000488737 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
ABCB1-207ENST00000488737 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
ABCB1-207ENST00000488737 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
ABCB1-207ENST00000488737 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
ABCB1-207ENST00000488737 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
ABCB1-207ENST00000488737 REC8O95072 547 aa17.52■□□□□ 0.4
ABCB1-207ENST00000488737 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.4
ABCB1-207ENST00000488737 IP6K1Q92551 441 aa17.52■□□□□ 0.4
ABCB1-207ENST00000488737 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.4
ABCB1-207ENST00000488737 NUTM2GQ5VZR2 741 aa17.52■□□□□ 0.39
ABCB1-207ENST00000488737 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.39
ABCB1-207ENST00000488737 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.39
ABCB1-207ENST00000488737 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.39
ABCB1-207ENST00000488737 ADGRL3Q9HAR2 1447 aa17.52■□□□□ 0.39
ABCB1-207ENST00000488737 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
ABCB1-207ENST00000488737 SALL3Q9BXA9 1300 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 GOLGA6L3A6NEY3 463 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 PDE1AP54750 535 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
ABCB1-207ENST00000488737 SKOR2Q2VWA4 1001 aaPredicted RBP17.5■□□□□ 0.39
ABCB1-207ENST00000488737 APBB1O00213 710 aa17.5■□□□□ 0.39
ABCB1-207ENST00000488737 ERC2O15083 957 aa17.5■□□□□ 0.39
ABCB1-207ENST00000488737 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
ABCB1-207ENST00000488737 HOXB7P09629 217 aa17.49■□□□□ 0.39
ABCB1-207ENST00000488737 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
ABCB1-207ENST00000488737 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
ABCB1-207ENST00000488737 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
ABCB1-207ENST00000488737 AOX1Q06278 1338 aa17.47■□□□□ 0.39
ABCB1-207ENST00000488737 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
ABCB1-207ENST00000488737 ST18O60284 1047 aa17.46■□□□□ 0.39
ABCB1-207ENST00000488737 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
ABCB1-207ENST00000488737 FAM43AQ8N2R8 423 aa17.46■□□□□ 0.39
ABCB1-207ENST00000488737 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
ABCB1-207ENST00000488737 NCAPD2Q15021 1401 aa17.46■□□□□ 0.38
ABCB1-207ENST00000488737 C14orf37Q86TY3 774 aa17.46■□□□□ 0.38
ABCB1-207ENST00000488737 STAP2Q9UGK3 403 aa17.46■□□□□ 0.38
ABCB1-207ENST00000488737 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.38
ABCB1-207ENST00000488737 SLIT3O75094 1523 aa17.45■□□□□ 0.38
ABCB1-207ENST00000488737 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
ABCB1-207ENST00000488737 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
ABCB1-207ENST00000488737 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
ABCB1-207ENST00000488737 MX1P20591 662 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 MRE11P49959 708 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 NUCB2P80303 420 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 USP44Q9H0E7 712 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
ABCB1-207ENST00000488737 CWC22Q9HCG8 908 aaKnown RBP17.44■□□□□ 0.38
ABCB1-207ENST00000488737 LRRFIP2Q9Y608 721 aaKnown RBP17.44■□□□□ 0.38
ABCB1-207ENST00000488737 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
ABCB1-207ENST00000488737 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
ABCB1-207ENST00000488737 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
ABCB1-207ENST00000488737 PSME1Q06323 249 aa17.43■□□□□ 0.38
ABCB1-207ENST00000488737 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
ABCB1-207ENST00000488737 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
ABCB1-207ENST00000488737 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
ABCB1-207ENST00000488737 STRCP1A6NGW2 1772 aa17.42■□□□□ 0.38
ABCB1-207ENST00000488737 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
ABCB1-207ENST00000488737 AKAP4Q5JQC9 854 aa17.42■□□□□ 0.38
ABCB1-207ENST00000488737 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
ABCB1-207ENST00000488737 EPB41L2O43491 1005 aaKnown RBP17.41■□□□□ 0.38
ABCB1-207ENST00000488737 SSFA2P28290 1259 aa17.41■□□□□ 0.38
ABCB1-207ENST00000488737 ESYT1Q9BSJ8 1104 aa17.41■□□□□ 0.38
ABCB1-207ENST00000488737 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
ABCB1-207ENST00000488737 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
ABCB1-207ENST00000488737 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
ABCB1-207ENST00000488737 POLA2Q14181 598 aa17.4■□□□□ 0.38
ABCB1-207ENST00000488737 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
ABCB1-207ENST00000488737 IL17RAQ96F46 866 aa17.4■□□□□ 0.38
ABCB1-207ENST00000488737 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
ABCB1-207ENST00000488737 MCCP23508 829 aa17.39■□□□□ 0.38
ABCB1-207ENST00000488737 ANAPC15P60006 121 aa17.39■□□□□ 0.38
ABCB1-207ENST00000488737 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.38
ABCB1-207ENST00000488737 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
ABCB1-207ENST00000488737 MCM2P49736 904 aa17.39■□□□□ 0.37
ABCB1-207ENST00000488737 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
ABCB1-207ENST00000488737 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
ABCB1-207ENST00000488737 CHMLP26374 656 aa17.38■□□□□ 0.37
ABCB1-207ENST00000488737 TEFQ10587 303 aa17.38■□□□□ 0.37
ABCB1-207ENST00000488737 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
ABCB1-207ENST00000488737 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
ABCB1-207ENST00000488737 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
ABCB1-207ENST00000488737 GRPEL1Q9HAV7 217 aa17.37■□□□□ 0.37
ABCB1-207ENST00000488737 ADAMTS7Q9UKP4 1686 aa17.37■□□□□ 0.37
ABCB1-207ENST00000488737 DNAAF4Q8WXU2 420 aa17.37■□□□□ 0.37
ABCB1-207ENST00000488737 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
ABCB1-207ENST00000488737 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
ABCB1-207ENST00000488737 PPP1R42Q7Z4L9 355 aa17.36■□□□□ 0.37
ABCB1-207ENST00000488737 MST1RQ04912 1400 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms