RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
NELFE-209ENST00000488426 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
NELFE-209ENST00000488426 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
NELFE-209ENST00000488426 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
NELFE-209ENST00000488426 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
NELFE-209ENST00000488426 KCNQ4P56696 695 aa16.43■□□□□ 0.22
NELFE-209ENST00000488426 GNAI1P63096 354 aa16.43■□□□□ 0.22
NELFE-209ENST00000488426 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
NELFE-209ENST00000488426 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
NELFE-209ENST00000488426 TSR2Q969E8 191 aaKnown RBP16.42■□□□□ 0.22
NELFE-209ENST00000488426 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
NELFE-209ENST00000488426 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
NELFE-209ENST00000488426 ZNF853P0CG23 659 aa16.42■□□□□ 0.22
NELFE-209ENST00000488426 BTAF1O14981 1849 aa16.41■□□□□ 0.22
NELFE-209ENST00000488426 CYP27B1O15528 508 aa16.41■□□□□ 0.22
NELFE-209ENST00000488426 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
NELFE-209ENST00000488426 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
NELFE-209ENST00000488426 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
NELFE-209ENST00000488426 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
NELFE-209ENST00000488426 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
NELFE-209ENST00000488426 PLIN1O60240 522 aa16.39■□□□□ 0.22
NELFE-209ENST00000488426 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.22
NELFE-209ENST00000488426 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.22
NELFE-209ENST00000488426 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
NELFE-209ENST00000488426 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
NELFE-209ENST00000488426 BCAR3O75815 825 aa16.38■□□□□ 0.21
NELFE-209ENST00000488426 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
NELFE-209ENST00000488426 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
NELFE-209ENST00000488426 LRP5O75197 1615 aa16.37■□□□□ 0.21
NELFE-209ENST00000488426 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
NELFE-209ENST00000488426 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
NELFE-209ENST00000488426 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
NELFE-209ENST00000488426 UTRNP46939 3433 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
NELFE-209ENST00000488426 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
NELFE-209ENST00000488426 EXOC6Q8TAG9 804 aa16.35■□□□□ 0.21
NELFE-209ENST00000488426 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
NELFE-209ENST00000488426 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
NELFE-209ENST00000488426 MCM10Q7L590 875 aa16.35■□□□□ 0.21
NELFE-209ENST00000488426 AMOTQ4VCS5 1084 aa16.34■□□□□ 0.21
NELFE-209ENST00000488426 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
NELFE-209ENST00000488426 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
NELFE-209ENST00000488426 CHL1O00533 1208 aa16.33■□□□□ 0.21
NELFE-209ENST00000488426 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.21
NELFE-209ENST00000488426 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.21
NELFE-209ENST00000488426 CRBNQ96SW2 442 aa16.33■□□□□ 0.21
NELFE-209ENST00000488426 STK32BQ9NY57 414 aa16.33■□□□□ 0.21
NELFE-209ENST00000488426 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
NELFE-209ENST00000488426 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
NELFE-209ENST00000488426 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.2
NELFE-209ENST00000488426 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
NELFE-209ENST00000488426 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
NELFE-209ENST00000488426 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 BRPF1P55201 1214 aaPredicted RBP16.3■□□□□ 0.2
NELFE-209ENST00000488426 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
NELFE-209ENST00000488426 PKD1L3Q7Z443 1732 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 PIGBQ92521 554 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
NELFE-209ENST00000488426 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 VAMP4O75379 141 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 MS4A1P11836 297 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 PHKG2P15735 406 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 PTGER2P43116 358 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 FRAT1Q92837 279 aaPredicted RBP16.29■□□□□ 0.2
NELFE-209ENST00000488426 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
NELFE-209ENST00000488426 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
NELFE-209ENST00000488426 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
NELFE-209ENST00000488426 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
NELFE-209ENST00000488426 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
NELFE-209ENST00000488426 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
NELFE-209ENST00000488426 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
NELFE-209ENST00000488426 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
NELFE-209ENST00000488426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■■□□□ 13.6
NELFE-209ENST00000488426 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
NELFE-209ENST00000488426 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.2
NELFE-209ENST00000488426 ITGB4P16144 1822 aa16.27■□□□□ 0.2
NELFE-209ENST00000488426 LY75O60449 1722 aa16.27■□□□□ 0.2
NELFE-209ENST00000488426 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.19
NELFE-209ENST00000488426 IFNL2Q8IZJ0 200 aa16.27■□□□□ 0.19
NELFE-209ENST00000488426 TSPYL6Q8N831 410 aa16.27■□□□□ 0.19
NELFE-209ENST00000488426 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.19
NELFE-209ENST00000488426 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.19
NELFE-209ENST00000488426 IPO8O15397 1037 aaKnown RBP16.26■□□□□ 0.19
NELFE-209ENST00000488426 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
NELFE-209ENST00000488426 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
NELFE-209ENST00000488426 AAMPQ13685 434 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms