RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 BACH1O14867 736 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 CRTC2Q53ET0 693 aaPredicted RBP6.3□□□□□ -1.4
RBM28-207ENST00000488249 CDCA8Q53HL2 280 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 SIX5Q8N196 739 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
RBM28-207ENST00000488249 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
RBM28-207ENST00000488249 SLC4A9Q96Q91 983 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
RBM28-207ENST00000488249 ZNF358Q9NW07 568 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 SERTAD1Q9UHV2 236 aa6.3□□□□□ -1.4
RBM28-207ENST00000488249 FAM196BA6NMK8 535 aa6.29□□□□□ -1.4
RBM28-207ENST00000488249 DKK1O94907 266 aa6.29□□□□□ -1.4
RBM28-207ENST00000488249 SMTNP53814 917 aa6.29□□□□□ -1.4
RBM28-207ENST00000488249 SRPK2P78362 688 aaKnown RBP6.29□□□□□ -1.4
RBM28-207ENST00000488249 PTK7Q13308 1070 aa6.29□□□□□ -1.4
RBM28-207ENST00000488249 TLR1Q15399 786 aa6.29□□□□□ -1.4
RBM28-207ENST00000488249 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.28□□□□□ -1.4
RBM28-207ENST00000488249 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L10C9JJH3 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L12C9JPN9 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L21D6R901 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 GTF2E1P29083 439 aaPredicted RBP6.28□□□□□ -1.4
RBM28-207ENST00000488249 PTSQ03393 145 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 POU4F2Q12837 409 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 MTFR1Q15390 333 aa6.28□□□□□ -1.4
RBM28-207ENST00000488249 TMEM214Q6NUQ4 689 aaKnown RBP6.28□□□□□ -1.4
RBM28-207ENST00000488249 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
RBM28-207ENST00000488249 A6NJY4 79 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 SFI1A8K8P3 1242 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 M0R2N6 131 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 RHOQP17081 205 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 DPYDQ12882 1025 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 WDR44Q5JSH3 913 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
RBM28-207ENST00000488249 PPARGC1BQ86YN6 1023 aaKnown RBP6.27□□□□□ -1.41
RBM28-207ENST00000488249 ANKMY2Q8IV38 441 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 NBPF15Q8N660 670 aa6.27□□□□□ -1.41
RBM28-207ENST00000488249 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
RBM28-207ENST00000488249 SLC35F4A4IF30 521 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 CDK2AP1O14519 115 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 SEC13P55735 322 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 GNASQ5JWF2 1037 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 PBXIP1Q96AQ6 731 aa6.26□□□□□ -1.41
RBM28-207ENST00000488249 ZNF775Q96BV0 537 aaPredicted RBP6.26□□□□□ -1.41
RBM28-207ENST00000488249 SENP3-EIF4A1A0A087X0R7 540 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 TERTO14746 1132 aaKnown RBP6.25□□□□□ -1.41
RBM28-207ENST00000488249 ATG7O95352 703 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 EPHA4P54764 986 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 C4orf17Q53FE4 359 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 NPAS3Q8IXF0 933 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 TNS4Q8IZW8 715 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 CCDC155Q8N6L0 562 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 ARXQ96QS3 562 aa6.25□□□□□ -1.41
RBM28-207ENST00000488249 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
RBM28-207ENST00000488249 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
RBM28-207ENST00000488249 PPFIA3O75145 1194 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 PHKA2P46019 1235 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 FOXK2Q01167 660 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 ELOAQ14241 798 aaKnown RBP6.24□□□□□ -1.41
RBM28-207ENST00000488249 TSEN2Q8NCE0 465 aaKnown RBP6.24□□□□□ -1.41
RBM28-207ENST00000488249 FAM200AQ8TCP9 573 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 NIFKQ9BYG3 293 aaKnown RBP6.24□□□□□ -1.41
RBM28-207ENST00000488249 TIMMDC1Q9NPL8 285 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 NOVA2Q9UNW9 492 aaKnown RBP6.24□□□□□ -1.41
RBM28-207ENST00000488249 USP3Q9Y6I4 520 aa6.24□□□□□ -1.41
RBM28-207ENST00000488249 PPP1R15AO75807 674 aaPredicted RBP6.23□□□□□ -1.41
RBM28-207ENST00000488249 VEGFBP49765 207 aa6.23□□□□□ -1.41
RBM28-207ENST00000488249 ZNF295-AS1Q8N0V1 137 aa6.23□□□□□ -1.41
RBM28-207ENST00000488249 ARID3AQ99856 593 aa6.23□□□□□ -1.41
RBM28-207ENST00000488249 DYRK1BQ9Y463 629 aa6.23□□□□□ -1.41
RBM28-207ENST00000488249 H3BM21 787 aa6.22□□□□□ -1.41
RBM28-207ENST00000488249 NFX1Q12986 1120 aaKnown RBP6.22□□□□□ -1.41
RBM28-207ENST00000488249 SLC9A9Q8IVB4 645 aa6.22□□□□□ -1.41
RBM28-207ENST00000488249 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
RBM28-207ENST00000488249 CABP1Q9NZU7 370 aa6.22□□□□□ -1.41
RBM28-207ENST00000488249 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
RBM28-207ENST00000488249 A0A1B0GTH6 734 aa6.21□□□□□ -1.42
RBM28-207ENST00000488249 ITGA6P23229 1130 aa6.21□□□□□ -1.42
RBM28-207ENST00000488249 PLA2G4AP47712 749 aa6.21□□□□□ -1.42
RBM28-207ENST00000488249 TBCELQ5QJ74 424 aa6.21□□□□□ -1.42
RBM28-207ENST00000488249 SLC16A10Q8TF71 515 aa6.21□□□□□ -1.42
RBM28-207ENST00000488249 GAS2L1Q99501 681 aaPredicted RBP6.21□□□□□ -1.42
RBM28-207ENST00000488249 TSPAN10Q9H1Z9 355 aaPredicted RBP6.21□□□□□ -1.42
RBM28-207ENST00000488249 F11P03951 625 aa6.2□□□□□ -1.42
RBM28-207ENST00000488249 TEAD4Q15561 434 aa6.2□□□□□ -1.42
RBM28-207ENST00000488249 ZDHHC1Q8WTX9 485 aa6.2□□□□□ -1.42
RBM28-207ENST00000488249 STK32AQ8WU08 396 aa6.2□□□□□ -1.42
RBM28-207ENST00000488249 ACIN1Q9UKV3 1341 aaKnown RBP6.2□□□□□ -1.42
RBM28-207ENST00000488249 ATAD2Q6PL18 1390 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms