RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 USP17L13C9JLJ4 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L12C9JPN9 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L11C9JVI0 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L21D6R901 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L18D6R9N7 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L22D6RA61 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L17D6RBQ6 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L19D6RCP7 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L20D6RJB6 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 BACH1O14867 736 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 MAN1A2O60476 641 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L24Q0WX57 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 ZNF594Q96JF6 807 aaPredicted RBP8.71□□□□□ -1.02
PTEN-204ENST00000487939 ZBTB7BO15156 539 aaPredicted RBP8.7□□□□□ -1.02
PTEN-204ENST00000487939 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
PTEN-204ENST00000487939 PTK7Q13308 1070 aa8.7□□□□□ -1.02
PTEN-204ENST00000487939 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
PTEN-204ENST00000487939 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
PTEN-204ENST00000487939 ARID3AQ99856 593 aa8.7□□□□□ -1.02
PTEN-204ENST00000487939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.69□□□□□ -1.02
PTEN-204ENST00000487939 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 TMEM229AB2RXF0 380 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 CENPCQ03188 943 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 TLR1Q15399 786 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 CRTC2Q53ET0 693 aaPredicted RBP8.69□□□□□ -1.02
PTEN-204ENST00000487939 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
PTEN-204ENST00000487939 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 ZNF358Q9NW07 568 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 KIAA1024Q9UPX6 916 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
PTEN-204ENST00000487939 M0R2N6 131 aa8.68□□□□□ -1.02
PTEN-204ENST00000487939 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
PTEN-204ENST00000487939 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
PTEN-204ENST00000487939 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
PTEN-204ENST00000487939 ANKMY2Q8IV38 441 aa8.68□□□□□ -1.02
PTEN-204ENST00000487939 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
PTEN-204ENST00000487939 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
PTEN-204ENST00000487939 FIGNL2A6NMB9 653 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 ATG7O95352 703 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 SMTNP53814 917 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 SEC13P55735 322 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTEN-204ENST00000487939 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
PTEN-204ENST00000487939 GRIP2Q9C0E4 1043 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 DNMT3LQ9UJW3 386 aa8.67□□□□□ -1.02
PTEN-204ENST00000487939 DPYDQ12882 1025 aa8.66□□□□□ -1.02
PTEN-204ENST00000487939 ELOAQ14241 798 aaKnown RBP8.66□□□□□ -1.02
PTEN-204ENST00000487939 GNASQ5JWF2 1037 aa8.66□□□□□ -1.02
PTEN-204ENST00000487939 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
PTEN-204ENST00000487939 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
PTEN-204ENST00000487939 FHDC1Q9C0D6 1143 aaPredicted RBP8.66□□□□□ -1.02
PTEN-204ENST00000487939 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
PTEN-204ENST00000487939 DKK1O94907 266 aa8.65□□□□□ -1.02
PTEN-204ENST00000487939 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
PTEN-204ENST00000487939 FAM200AQ8TCP9 573 aa8.65□□□□□ -1.02
PTEN-204ENST00000487939 SLC16A10Q8TF71 515 aa8.65□□□□□ -1.02
PTEN-204ENST00000487939 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
PTEN-204ENST00000487939 A6NJY4 79 aa8.64□□□□□ -1.03
PTEN-204ENST00000487939 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
PTEN-204ENST00000487939 CDK2AP1O14519 115 aa8.64□□□□□ -1.03
PTEN-204ENST00000487939 MTFR1Q15390 333 aa8.64□□□□□ -1.03
PTEN-204ENST00000487939 WDR44Q5JSH3 913 aa8.64□□□□□ -1.03
PTEN-204ENST00000487939 PPARGC1BQ86YN6 1023 aaKnown RBP8.64□□□□□ -1.03
PTEN-204ENST00000487939 SPATA31C2B4DYI2 1134 aa8.63□□□□□ -1.03
PTEN-204ENST00000487939 TAS1R3Q7RTX0 852 aa8.63□□□□□ -1.03
PTEN-204ENST00000487939 PRICKLE2Q7Z3G6 844 aa8.63□□□□□ -1.03
PTEN-204ENST00000487939 SOBPA7XYQ1 873 aa8.62□□□□□ -1.03
PTEN-204ENST00000487939 ZSCAN1Q8NBB4 408 aa8.62□□□□□ -1.03
PTEN-204ENST00000487939 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
PTEN-204ENST00000487939 ARXQ96QS3 562 aa8.62□□□□□ -1.03
PTEN-204ENST00000487939 NIFKQ9BYG3 293 aaKnown RBP8.62□□□□□ -1.03
PTEN-204ENST00000487939 SCHIP1Q9P0W5 487 aaPredicted RBP8.62□□□□□ -1.03
PTEN-204ENST00000487939 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
PTEN-204ENST00000487939 GMPRP36959 345 aa8.61□□□□□ -1.03
PTEN-204ENST00000487939 EPHA4P54764 986 aa8.61□□□□□ -1.03
PTEN-204ENST00000487939 POU4F2Q12837 409 aa8.61□□□□□ -1.03
PTEN-204ENST00000487939 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
PTEN-204ENST00000487939 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
PTEN-204ENST00000487939 TNS4Q8IZW8 715 aa8.61□□□□□ -1.03
PTEN-204ENST00000487939 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
PTEN-204ENST00000487939 PTSQ03393 145 aa8.6□□□□□ -1.03
PTEN-204ENST00000487939 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
PTEN-204ENST00000487939 ZMIZ1Q9ULJ6 1067 aa8.6□□□□□ -1.03
PTEN-204ENST00000487939 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 RHOQP17081 205 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 FOXK2Q01167 660 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 SWI5Q1ZZU3 235 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 SLC9A9Q8IVB4 645 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 IRF7Q92985 503 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
PTEN-204ENST00000487939 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
PTEN-204ENST00000487939 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
PTEN-204ENST00000487939 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
PTEN-204ENST00000487939 STK32AQ8WU08 396 aa8.58□□□□□ -1.04
PTEN-204ENST00000487939 TIMMDC1Q9NPL8 285 aa8.58□□□□□ -1.04
PTEN-204ENST00000487939 CABP1Q9NZU7 370 aa8.58□□□□□ -1.04
PTEN-204ENST00000487939 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
PTEN-204ENST00000487939 DYRK1BQ9Y463 629 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms