RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.64
NR1H3-224ENST00000487913 KDM2BQ8NHM5 1336 aa19.01■□□□□ 0.63
NR1H3-224ENST00000487913 HSPA1AP0DMV8 641 aaKnown RBP19.01■□□□□ 0.63
NR1H3-224ENST00000487913 HSPA1BP0DMV9 641 aaKnown RBP19.01■□□□□ 0.63
NR1H3-224ENST00000487913 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
NR1H3-224ENST00000487913 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
NR1H3-224ENST00000487913 KCNA3P22001 575 aa19■□□□□ 0.63
NR1H3-224ENST00000487913 ATP6V1AP38606 617 aa19■□□□□ 0.63
NR1H3-224ENST00000487913 INSRP06213 1382 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 TMF1P82094 1093 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 NKX1-1Q15270 411 aaPredicted RBP18.99■□□□□ 0.63
NR1H3-224ENST00000487913 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
NR1H3-224ENST00000487913 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 RNF181Q9P0P0 153 aa18.99■□□□□ 0.63
NR1H3-224ENST00000487913 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
NR1H3-224ENST00000487913 SMC1BQ8NDV3 1235 aa18.98■□□□□ 0.63
NR1H3-224ENST00000487913 TRAPPC3LQ5T215 181 aa18.97■□□□□ 0.63
NR1H3-224ENST00000487913 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
NR1H3-224ENST00000487913 TMOD3Q9NYL9 352 aa18.97■□□□□ 0.63
NR1H3-224ENST00000487913 BRCA1P38398 1863 aaKnown RBP18.97■□□□□ 0.63
NR1H3-224ENST00000487913 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
NR1H3-224ENST00000487913 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
NR1H3-224ENST00000487913 C4AP0C0L4 1744 aa18.96■□□□□ 0.63
NR1H3-224ENST00000487913 FYB1O15117 783 aa18.95■□□□□ 0.62
NR1H3-224ENST00000487913 GYS1P13807 737 aa18.95■□□□□ 0.62
NR1H3-224ENST00000487913 ARHGEF1Q92888 912 aaKnown RBP18.95■□□□□ 0.62
NR1H3-224ENST00000487913 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
NR1H3-224ENST00000487913 PIM2Q9P1W9 311 aa18.95■□□□□ 0.62
NR1H3-224ENST00000487913 FLT4P35916 1363 aa18.94■□□□□ 0.62
NR1H3-224ENST00000487913 DALRD3Q5D0E6 543 aaKnown RBP18.94■□□□□ 0.62
NR1H3-224ENST00000487913 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
NR1H3-224ENST00000487913 TNRC6CQ9HCJ0 1690 aaKnown RBP18.93■□□□□ 0.62
NR1H3-224ENST00000487913 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
NR1H3-224ENST00000487913 KDRP35968 1356 aa18.93■□□□□ 0.62
NR1H3-224ENST00000487913 SLC34A2O95436 690 aa18.92■□□□□ 0.62
NR1H3-224ENST00000487913 SPG7Q9UQ90 795 aa18.92■□□□□ 0.62
NR1H3-224ENST00000487913 ARFGEF1Q9Y6D6 1849 aa18.92■□□□□ 0.62
NR1H3-224ENST00000487913 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
NR1H3-224ENST00000487913 ADRA2BP18089 450 aa18.9■□□□□ 0.62
NR1H3-224ENST00000487913 RFC4P35249 363 aa18.9■□□□□ 0.62
NR1H3-224ENST00000487913 TESK2Q96S53 571 aa18.9■□□□□ 0.62
NR1H3-224ENST00000487913 CHRNA5P30532 468 aa18.89■□□□□ 0.61
NR1H3-224ENST00000487913 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.61
NR1H3-224ENST00000487913 PHKG2P15735 406 aa18.88■□□□□ 0.61
NR1H3-224ENST00000487913 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
NR1H3-224ENST00000487913 RPS6KA4O75676 772 aa18.87■□□□□ 0.61
NR1H3-224ENST00000487913 RASSF7Q02833 373 aa18.87■□□□□ 0.61
NR1H3-224ENST00000487913 DDR1Q08345 913 aa18.87■□□□□ 0.61
NR1H3-224ENST00000487913 RC3H1Q5TC82 1133 aaKnown RBP18.87■□□□□ 0.61
NR1H3-224ENST00000487913 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
NR1H3-224ENST00000487913 CNTNAP4Q9C0A0 1308 aa18.87■□□□□ 0.61
NR1H3-224ENST00000487913 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-224ENST00000487913 FKBP8Q14318 412 aa18.85■□□□□ 0.61
NR1H3-224ENST00000487913 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
NR1H3-224ENST00000487913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
NR1H3-224ENST00000487913 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
NR1H3-224ENST00000487913 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
NR1H3-224ENST00000487913 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
NR1H3-224ENST00000487913 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
NR1H3-224ENST00000487913 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
NR1H3-224ENST00000487913 GLTPD2A6NH11 291 aa18.83■□□□□ 0.6
NR1H3-224ENST00000487913 EYA1Q99502 592 aa18.83■□□□□ 0.6
NR1H3-224ENST00000487913 SBF1O95248 1867 aa18.83■□□□□ 0.6
NR1H3-224ENST00000487913 COL5A3P25940 1745 aaPredicted RBP18.83■□□□□ 0.6
NR1H3-224ENST00000487913 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
NR1H3-224ENST00000487913 LMNB1P20700 586 aa18.81■□□□□ 0.6
NR1H3-224ENST00000487913 ZNF831Q5JPB2 1677 aa18.81■□□□□ 0.6
NR1H3-224ENST00000487913 MKRN1Q9UHC7 482 aaKnown RBP18.8■□□□□ 0.6
NR1H3-224ENST00000487913 USP42Q9H9J4 1324 aaKnown RBP18.79■□□□□ 0.6
NR1H3-224ENST00000487913 POTECB2RU33 542 aa18.79■□□□□ 0.6
NR1H3-224ENST00000487913 FOXN1O15353 648 aa18.79■□□□□ 0.6
NR1H3-224ENST00000487913 POLRMTO00411 1230 aaKnown RBP18.78■□□□□ 0.6
NR1H3-224ENST00000487913 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
NR1H3-224ENST00000487913 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.6
NR1H3-224ENST00000487913 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
NR1H3-224ENST00000487913 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
NR1H3-224ENST00000487913 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
NR1H3-224ENST00000487913 TM4SF1P30408 202 aa18.76■□□□□ 0.59
NR1H3-224ENST00000487913 CREBZFQ9NS37 354 aa18.76■□□□□ 0.59
NR1H3-224ENST00000487913 PTCD1O75127 700 aaKnown RBP18.75■□□□□ 0.59
NR1H3-224ENST00000487913 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
NR1H3-224ENST00000487913 NFKBIEO00221 500 aa18.74■□□□□ 0.59
NR1H3-224ENST00000487913 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
NR1H3-224ENST00000487913 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
NR1H3-224ENST00000487913 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
NR1H3-224ENST00000487913 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
NR1H3-224ENST00000487913 CABP4P57796 275 aa18.72■□□□□ 0.59
NR1H3-224ENST00000487913 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
NR1H3-224ENST00000487913 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
NR1H3-224ENST00000487913 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
NR1H3-224ENST00000487913 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
NR1H3-224ENST00000487913 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
NR1H3-224ENST00000487913 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
NR1H3-224ENST00000487913 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
NR1H3-224ENST00000487913 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
NR1H3-224ENST00000487913 CTCFP49711 727 aaPredicted RBP18.7■□□□□ 0.58
NR1H3-224ENST00000487913 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
NR1H3-224ENST00000487913 CHADLQ6NUI6 762 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms