RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
U2AF1-211ENST00000486519 HDGFL2Q7Z4V5 671 aaPredicted RBP21.81■■□□□ 1.08
U2AF1-211ENST00000486519 RAPGEF4Q8WZA2 1011 aa21.81■■□□□ 1.08
U2AF1-211ENST00000486519 CCDC88AQ3V6T2 1871 aa21.8■■□□□ 1.08
U2AF1-211ENST00000486519 FOXN1O15353 648 aa21.8■■□□□ 1.08
U2AF1-211ENST00000486519 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
U2AF1-211ENST00000486519 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
U2AF1-211ENST00000486519 CGNL1Q0VF96 1302 aa21.8■■□□□ 1.08
U2AF1-211ENST00000486519 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
U2AF1-211ENST00000486519 TATP17735 454 aaPredicted RBP21.79■■□□□ 1.08
U2AF1-211ENST00000486519 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
U2AF1-211ENST00000486519 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
U2AF1-211ENST00000486519 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
U2AF1-211ENST00000486519 RASSF7Q02833 373 aa21.78■■□□□ 1.08
U2AF1-211ENST00000486519 COL5A3P25940 1745 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-211ENST00000486519 TMF1P82094 1093 aa21.76■■□□□ 1.07
U2AF1-211ENST00000486519 CCDC87Q9NVE4 849 aa21.76■■□□□ 1.07
U2AF1-211ENST00000486519 MKRN1Q9UHC7 482 aaKnown RBP21.76■■□□□ 1.07
U2AF1-211ENST00000486519 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
U2AF1-211ENST00000486519 GYS1P13807 737 aa21.75■■□□□ 1.07
U2AF1-211ENST00000486519 ATP6V1AP38606 617 aa21.75■■□□□ 1.07
U2AF1-211ENST00000486519 HMGB2P26583 209 aaKnown RBP21.74■■□□□ 1.07
U2AF1-211ENST00000486519 CHRNA5P30532 468 aa21.74■■□□□ 1.07
U2AF1-211ENST00000486519 ARHGEF1Q92888 912 aaKnown RBP21.74■■□□□ 1.07
U2AF1-211ENST00000486519 PIM2Q9P1W9 311 aa21.74■■□□□ 1.07
U2AF1-211ENST00000486519 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
U2AF1-211ENST00000486519 NLGN1Q8N2Q7 840 aa21.73■■□□□ 1.07
U2AF1-211ENST00000486519 COG3Q96JB2 828 aa21.73■■□□□ 1.07
U2AF1-211ENST00000486519 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
U2AF1-211ENST00000486519 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-211ENST00000486519 POTECB2RU33 542 aa21.72■■□□□ 1.07
U2AF1-211ENST00000486519 DALRD3Q5D0E6 543 aaKnown RBP21.72■■□□□ 1.07
U2AF1-211ENST00000486519 KDRP35968 1356 aa21.72■■□□□ 1.07
U2AF1-211ENST00000486519 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
U2AF1-211ENST00000486519 TRAPPC3LQ5T215 181 aa21.71■■□□□ 1.07
U2AF1-211ENST00000486519 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
U2AF1-211ENST00000486519 ATG3Q9NT62 314 aa21.7■■□□□ 1.06
U2AF1-211ENST00000486519 TERF2IPQ9NYB0 399 aa21.7■■□□□ 1.06
U2AF1-211ENST00000486519 PCDH10Q9P2E7 1040 aa21.7■■□□□ 1.06
U2AF1-211ENST00000486519 PARP3Q9Y6F1 533 aa21.7■■□□□ 1.06
U2AF1-211ENST00000486519 DDR1Q08345 913 aa21.69■■□□□ 1.06
U2AF1-211ENST00000486519 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-211ENST00000486519 RTCBQ9Y3I0 505 aaKnown RBP21.69■■□□□ 1.06
U2AF1-211ENST00000486519 GLTPD2A6NH11 291 aa21.68■■□□□ 1.06
U2AF1-211ENST00000486519 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
U2AF1-211ENST00000486519 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
U2AF1-211ENST00000486519 PRDM10Q9NQV6 1147 aa21.67■■□□□ 1.06
U2AF1-211ENST00000486519 TMOD3Q9NYL9 352 aa21.66■■□□□ 1.06
U2AF1-211ENST00000486519 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
U2AF1-211ENST00000486519 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
U2AF1-211ENST00000486519 INSRP06213 1382 aa21.64■■□□□ 1.06
U2AF1-211ENST00000486519 POTEIP0CG38 1075 aa21.64■■□□□ 1.05
U2AF1-211ENST00000486519 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
U2AF1-211ENST00000486519 ABHD8Q96I13 439 aa21.64■■□□□ 1.05
U2AF1-211ENST00000486519 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.05
U2AF1-211ENST00000486519 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.05
U2AF1-211ENST00000486519 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
U2AF1-211ENST00000486519 FKBP8Q14318 412 aa21.63■■□□□ 1.05
U2AF1-211ENST00000486519 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
U2AF1-211ENST00000486519 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
U2AF1-211ENST00000486519 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
U2AF1-211ENST00000486519 RFC4P35249 363 aa21.62■■□□□ 1.05
U2AF1-211ENST00000486519 LBX1P52954 281 aa21.62■■□□□ 1.05
U2AF1-211ENST00000486519 CNTNAP1P78357 1384 aa21.61■■□□□ 1.05
U2AF1-211ENST00000486519 ZC3H4Q9UPT8 1303 aaKnown RBP21.61■■□□□ 1.05
U2AF1-211ENST00000486519 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
U2AF1-211ENST00000486519 RPS6KA4O75676 772 aa21.6■■□□□ 1.05
U2AF1-211ENST00000486519 CNTNAP4Q9C0A0 1308 aa21.59■■□□□ 1.05
U2AF1-211ENST00000486519 ADRA2BP18089 450 aa21.59■■□□□ 1.05
U2AF1-211ENST00000486519 LMNB1P20700 586 aa21.59■■□□□ 1.05
U2AF1-211ENST00000486519 CTCFP49711 727 aaPredicted RBP21.59■■□□□ 1.05
U2AF1-211ENST00000486519 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
U2AF1-211ENST00000486519 FYB1O15117 783 aa21.58■■□□□ 1.05
U2AF1-211ENST00000486519 RBM42Q9BTD8 480 aaKnown RBP21.58■■□□□ 1.05
U2AF1-211ENST00000486519 DICER1Q9UPY3 1922 aaKnown RBP21.58■■□□□ 1.04
U2AF1-211ENST00000486519 NFKBIEO00221 500 aa21.57■■□□□ 1.04
U2AF1-211ENST00000486519 RC3H1Q5TC82 1133 aaKnown RBP21.57■■□□□ 1.04
U2AF1-211ENST00000486519 FLT4P35916 1363 aa21.57■■□□□ 1.04
U2AF1-211ENST00000486519 TJP1Q07157 1748 aa21.56■■□□□ 1.04
U2AF1-211ENST00000486519 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
U2AF1-211ENST00000486519 PHKG2P15735 406 aa21.56■■□□□ 1.04
U2AF1-211ENST00000486519 VEGFBP49765 207 aa21.56■■□□□ 1.04
U2AF1-211ENST00000486519 SPG7Q9UQ90 795 aa21.55■■□□□ 1.04
U2AF1-211ENST00000486519 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
U2AF1-211ENST00000486519 HSPA8P11142 646 aaKnown RBP21.54■■□□□ 1.04
U2AF1-211ENST00000486519 CHADLQ6NUI6 762 aa21.54■■□□□ 1.04
U2AF1-211ENST00000486519 WBP1LQ9NX94 342 aa21.54■■□□□ 1.04
U2AF1-211ENST00000486519 EMILIN1Q9Y6C2 1016 aa21.54■■□□□ 1.04
U2AF1-211ENST00000486519 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
U2AF1-211ENST00000486519 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
U2AF1-211ENST00000486519 TM4SF1P30408 202 aa21.52■■□□□ 1.04
U2AF1-211ENST00000486519 MLLT1Q03111 559 aaPredicted RBP21.52■■□□□ 1.04
U2AF1-211ENST00000486519 AIDAQ96BJ3 306 aa21.52■■□□□ 1.04
U2AF1-211ENST00000486519 ANKRD26Q9UPS8 1709 aa21.52■■□□□ 1.03
U2AF1-211ENST00000486519 FER1L6Q2WGJ9 1857 aa21.51■■□□□ 1.03
U2AF1-211ENST00000486519 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
U2AF1-211ENST00000486519 CCDC85CA6NKD9 419 aa21.5■■□□□ 1.03
U2AF1-211ENST00000486519 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
U2AF1-211ENST00000486519 RGS19P49795 217 aa21.49■■□□□ 1.03
U2AF1-211ENST00000486519 IFNL2Q8IZJ0 200 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms