RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
GABRE-209ENST00000486255 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.77
GABRE-209ENST00000486255 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 ZHX3Q9H4I2 956 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 KIF5CO60282 957 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 KIF18AQ8NI77 898 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 IRX3P78415 501 aaPredicted RBP10.27□□□□□ -0.77
GABRE-209ENST00000486255 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
GABRE-209ENST00000486255 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 MCM4P33991 863 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 CFAP57Q96MR6 1250 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 PREX2Q70Z35 1606 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 NEBLO76041 1014 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 EIF5P55010 431 aaKnown RBP10.26□□□□□ -0.77
GABRE-209ENST00000486255 GCC1Q96CN9 775 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 SLC52A1Q9NWF4 448 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■■■□□ 18.2
GABRE-209ENST00000486255 SYCE3A1L190 88 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 DESP17661 470 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 CCDC178Q5BJE1 867 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 LARP1BQ659C4 914 aaKnown RBP10.26□□□□□ -0.77
GABRE-209ENST00000486255 PPP6R1Q9UPN7 881 aa10.26□□□□□ -0.77
GABRE-209ENST00000486255 URI1O94763 535 aaPredicted RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 CCDC175P0C221 793 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 MNAT1P51948 309 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 CTR9Q6PD62 1173 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 NOL7Q9UMY1 257 aaKnown RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 SSR1P43307 286 aaKnown RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 SPA17Q15506 151 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 RAI14Q9P0K7 980 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 ANKRD18BA2A2Z9 1011 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 IMMTQ16891 758 aaKnown RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 TTC39AQ5SRH9 613 aa10.25□□□□□ -0.77
GABRE-209ENST00000486255 CCDC97Q96F63 343 aaPredicted RBP10.25□□□□□ -0.77
GABRE-209ENST00000486255 LMAN1P49257 510 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 CCDC57Q2TAC2 916 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
GABRE-209ENST00000486255 CFAP100Q494V2 611 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
GABRE-209ENST00000486255 PZPP20742 1482 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
GABRE-209ENST00000486255 BACH2Q9BYV9 841 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 ZCCHC11Q5TAX3 1644 aaKnown RBP10.24□□□□□ -0.77
GABRE-209ENST00000486255 PSME1Q06323 249 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
GABRE-209ENST00000486255 TMX1Q9H3N1 280 aa10.24□□□□□ -0.77
GABRE-209ENST00000486255 AIMP1Q12904 312 aaKnown RBP10.23□□□□□ -0.77
GABRE-209ENST00000486255 CAMK4Q16566 473 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 LUZP1Q86V48 1076 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
GABRE-209ENST00000486255 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 SPECC1LQ69YQ0 1117 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 CLGNO14967 610 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 PDRG1Q9NUG6 133 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 A2MP01023 1474 aa10.23□□□□□ -0.77
GABRE-209ENST00000486255 MAST1Q9Y2H9 1570 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
GABRE-209ENST00000486255 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 POGZQ7Z3K3 1410 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 SURF6O75683 361 aaKnown RBP10.22□□□□□ -0.77
GABRE-209ENST00000486255 ZSCAN31Q96LW9 406 aaPredicted RBP10.22□□□□□ -0.77
GABRE-209ENST00000486255 DDX23Q9BUQ8 820 aaKnown RBP10.22□□□□□ -0.77
GABRE-209ENST00000486255 PROSER2Q86WR7 435 aaPredicted RBP10.22□□□□□ -0.77
GABRE-209ENST00000486255 C1orf115Q9H7X2 142 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 RAPGEF3O95398 923 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 MAP4K4O95819 1239 aaPredicted RBP10.22□□□□□ -0.77
GABRE-209ENST00000486255 ANAPC15P60006 121 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
GABRE-209ENST00000486255 DYNC1I1O14576 645 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 GNAI3P08754 354 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 CETN2P41208 172 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 BMS1Q14692 1282 aaKnown RBP10.21□□□□□ -0.77
GABRE-209ENST00000486255 CCDC183Q5T5S1 534 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 SAMD9LQ8IVG5 1584 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 ATP7AQ04656 1500 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 BRD4O60885 1362 aaPredicted RBP10.21□□□□□ -0.77
GABRE-209ENST00000486255 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.77
GABRE-209ENST00000486255 POTEJP0CG39 1038 aa10.21□□□□□ -0.78
GABRE-209ENST00000486255 MATR3P43243 847 aaKnown RBP eCLIP10.21□□□□□ -0.78
GABRE-209ENST00000486255 ARAP3Q8WWN8 1544 aa10.21□□□□□ -0.78
GABRE-209ENST00000486255 CDKL5O76039 1030 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 CCDC83Q8IWF9 413 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■■■■■ 34.1
GABRE-209ENST00000486255 HMOX1P09601 288 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 HSPA4P34932 840 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms